Identification of Novel Protein Biomarkers for Myasthenia Gravis by Integrating Human Proteomics with Genetic Instruments

IF 3.6 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Hong-Xi Chen, , , Xue Lin, , , Na-Na Zhang, , , Zi-Yan Shi, , , Ying Zhang, , , Qin Du, , , Ling-Yao Kong, , , Dong-Ren Sun, , , Rui Wang, , , Zi-Chao Mou, , , Yang-Yang Zhang, , , Yun-Tao Mo, , , Xiao-Fei Wang*, , and , Hong-Yu Zhou*, 
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引用次数: 0

Abstract

Myasthenia gravis (MG) presents significant health and economic challenges. To identify novel biomarkers, we analyzed proteomic data from 52,704 UK Biobank individuals, focusing on 1463 baseline proteins with follow-up >10 years. Baseline and potential MG cases were 1:5 matched to controls by using propensity score matching. We identified 38 consistently up-regulated differentially expressed proteins (DEPs) in both the baseline and potential MG groups compared to controls, categorized into cardiometabolic, inflammation, neurology, and oncology panels. These DEPs showed potential diagnostic value for distinguishing MG from other neuromuscular disorders, with the area under curves ranging from 0.616 to 0.735 across three models (logistic regression, support vector machine, and random forest). To further investigate causality, two-sample Mendelian Randomization (2SMR) and Cox proportional hazard regression were conducted, and we confirmed 18 potential causal proteins associated with MG, including those in the cardiometabolic panel (CEACAM8, OLR1, PGLYRP1, S100A11, and TNC), inflammation panel (CST7, HGF, IL1RN, IL-6, JCHAIN, OSM, PLAUR, and TGFA), neurology panel (CTSS, MMP8, TBC1D17, and VCAN), and oncology panel (S100A12). Currently, no approved drugs for MG specifically target these identified potential causal proteins and ligands. This comprehensive proteomic analysis highlights novel biomarkers associated with MG, suggesting potential targets for identifying risk proteins and future therapeutic interventions.

Abstract Image

结合人类蛋白质组学和遗传仪器鉴定重症肌无力的新蛋白生物标志物。
重症肌无力(MG)提出了重大的健康和经济挑战。为了确定新的生物标志物,我们分析了52,704名英国生物银行个体的蛋白质组学数据,重点关注1463种基线蛋白,随访10年。使用倾向评分匹配,基线和潜在MG病例与对照组1:5匹配。与对照组相比,我们在基线组和潜在MG组中发现了38个持续上调的差异表达蛋白(DEPs),分为心脏代谢、炎症、神经学和肿瘤学组。这些dep在区分MG和其他神经肌肉疾病方面显示出潜在的诊断价值,在三种模型(逻辑回归、支持向量机和随机森林)中,曲线下面积从0.616到0.735不等。为了进一步研究因果关系,我们进行了双样本孟德尔随机化(2SMR)和Cox比例风险回归,并确认了18种与MG相关的潜在因果蛋白,包括心脏代谢组(CEACAM8、OLR1、PGLYRP1、S100A11和TNC)、炎症组(CST7、HGF、IL1RN、IL-6、JCHAIN、OSM、PLAUR和TGFA)、神经学组(CTSS、MMP8、TBC1D17和VCAN)和肿瘤学组(S100A12)。目前,还没有批准的MG药物专门针对这些已确定的潜在致病蛋白和配体。这项全面的蛋白质组学分析强调了与MG相关的新生物标志物,为识别风险蛋白和未来的治疗干预提供了潜在的靶点。
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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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