{"title":"From fibrosis to malignancy: Insights into the genetic landscape linking idiopathic pulmonary fibrosis and lung cancer","authors":"Sanjukta Dasgupta","doi":"10.1016/j.genrep.2025.102333","DOIUrl":null,"url":null,"abstract":"<div><div>Idiopathic pulmonary fibrosis (IPF) markedly increases the risk of developing lung cancer, particularly non-small cell lung cancer (NSCLC); however, the molecular mechanisms underlying this progression remain poorly understood. This review indicates current findings on shared genetic alterations and mechanistic pathways that link chronic fibrotic remodeling with oncogenesis. By systematically analyzing recent transcriptomic and in silico studies, key molecular drivers were identified across five functional domains: extracellular matrix remodeling (e.g., <em>MMP1</em>, <em>SPP1</em>), chronic inflammation (e.g., <em>C1q</em>, <em>CCL13</em>), oxidative stress and genomic instability (e.g., <em>TP53</em>, <em>SETD2</em>), surfactant dysfunction (e.g., SFTPC, SFTPB), and dysregulated growth factor signaling (e.g., <em>EGFR</em>, <em>PIK3CA</em>). Emerging candidates such as <em>PLA2G7</em> and <em>SEMA6B</em> show potential roles in immune modulation and epithelial plasticity. Enrichment analyses confirm the involvement of these genes in extracellular matrix (ECM) remodeling, collagen degradation, integrin signaling, receptor tyrosine kinase signaling, and cytokine signaling. Although the findings remain correlative, they point to a shared molecular landscape underlying fibrotic and neoplastic transformation. Future studies integrating longitudinal cohorts and functional validation are essential to refine biomarker strategies and therapeutic targets for patients with fibrotic lung disease at risk of malignancy.</div></div>","PeriodicalId":12673,"journal":{"name":"Gene Reports","volume":"41 ","pages":"Article 102333"},"PeriodicalIF":0.9000,"publicationDate":"2025-09-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Gene Reports","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2452014425002067","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0
Abstract
Idiopathic pulmonary fibrosis (IPF) markedly increases the risk of developing lung cancer, particularly non-small cell lung cancer (NSCLC); however, the molecular mechanisms underlying this progression remain poorly understood. This review indicates current findings on shared genetic alterations and mechanistic pathways that link chronic fibrotic remodeling with oncogenesis. By systematically analyzing recent transcriptomic and in silico studies, key molecular drivers were identified across five functional domains: extracellular matrix remodeling (e.g., MMP1, SPP1), chronic inflammation (e.g., C1q, CCL13), oxidative stress and genomic instability (e.g., TP53, SETD2), surfactant dysfunction (e.g., SFTPC, SFTPB), and dysregulated growth factor signaling (e.g., EGFR, PIK3CA). Emerging candidates such as PLA2G7 and SEMA6B show potential roles in immune modulation and epithelial plasticity. Enrichment analyses confirm the involvement of these genes in extracellular matrix (ECM) remodeling, collagen degradation, integrin signaling, receptor tyrosine kinase signaling, and cytokine signaling. Although the findings remain correlative, they point to a shared molecular landscape underlying fibrotic and neoplastic transformation. Future studies integrating longitudinal cohorts and functional validation are essential to refine biomarker strategies and therapeutic targets for patients with fibrotic lung disease at risk of malignancy.
Gene ReportsBiochemistry, Genetics and Molecular Biology-Genetics
CiteScore
3.30
自引率
7.70%
发文量
246
审稿时长
49 days
期刊介绍:
Gene Reports publishes papers that focus on the regulation, expression, function and evolution of genes in all biological contexts, including all prokaryotic and eukaryotic organisms, as well as viruses. Gene Reports strives to be a very diverse journal and topics in all fields will be considered for publication. Although not limited to the following, some general topics include: DNA Organization, Replication & Evolution -Focus on genomic DNA (chromosomal organization, comparative genomics, DNA replication, DNA repair, mobile DNA, mitochondrial DNA, chloroplast DNA). Expression & Function - Focus on functional RNAs (microRNAs, tRNAs, rRNAs, mRNA splicing, alternative polyadenylation) Regulation - Focus on processes that mediate gene-read out (epigenetics, chromatin, histone code, transcription, translation, protein degradation). Cell Signaling - Focus on mechanisms that control information flow into the nucleus to control gene expression (kinase and phosphatase pathways controlled by extra-cellular ligands, Wnt, Notch, TGFbeta/BMPs, FGFs, IGFs etc.) Profiling of gene expression and genetic variation - Focus on high throughput approaches (e.g., DeepSeq, ChIP-Seq, Affymetrix microarrays, proteomics) that define gene regulatory circuitry, molecular pathways and protein/protein networks. Genetics - Focus on development in model organisms (e.g., mouse, frog, fruit fly, worm), human genetic variation, population genetics, as well as agricultural and veterinary genetics. Molecular Pathology & Regenerative Medicine - Focus on the deregulation of molecular processes in human diseases and mechanisms supporting regeneration of tissues through pluripotent or multipotent stem cells.