Psychromonas algicola sp. nov. and Psychromonas algarum sp. nov., two novel bacteria isolated from red macroalgae (Grateloupia sp.).

IF 2 3区 生物学 Q4 MICROBIOLOGY
Si-Jia Fan, Han-Zhe Zhang, Bei Pan, Tian-He Liu, De-Chen Lu, Zong-Jun Du
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引用次数: 0

Abstract

Two Gram-stain-negative and rod-shaped bacteria, designated as RZ5T and RZ22T, isolated from a red macroalgae sample, were characterized by a polyphasic approach to clarify their taxonomic position. Strain RZ5T grew at 4-33 °C (optimum, 25-28 °C), pH 6.5-8.5 (optimum, 7.0-8.0) and in 0.5-5.0% (w/v) NaCl (optimum, 1.0%). Strain RZ22T grew at 4-28 °C (optimum, 20-25 °C), pH 6.5-8.5 (optimum, 7.0-8.0) and in 2.0-5.0% (w/v) NaCl (optimum, 3.0%). Strain RZ5T possessed a flagellum and was motile, while strain RZ22T lacked a flagellum and was non-motile. Phylogenetic analysis based on 16S rRNA gene sequences indicated that both isolates belonged to the genus Psychromonas and were most closely related to Psychromonas aquatilis M1A1T (98.1%) and Psychromonas antarctica DSM 10704T (97.1%) for strains RZ5T and RZ22T, respectively. The predominant fatty acids of both strains were C16 : 0 and summed feature 3 (C16 : 1  ω7c/C16 : 1  ω6c). The major polar lipids for strain RZ5T comprised phosphatidylethanolamine (PE) and glycolipids (GLs), while those for strain RZ22T comprised PE, diphosphatidylglycerol and GLs. The average nt identity (ANI) and digital DNA-DNA hybridization (dDDH) values between strains RZ5T and RZ22T were 85.4% and 18.9%, respectively. Strain RZ5T had ANI values of 84.3-85.5% and dDDH values of 18.3-21.3% to members of the genus Psychromonas. Strain RZ22T had ANI values of 84.2-85.2% and dDDH values of 18.4-22.1% to members of the genus Psychromonas. The G+C content of the genomic DNA of strains RZ5T and RZ22T was 36.7 mol% and 35.6 mol%, respectively. Strains RZ5T and RZ22T possessed ubiquinone-8 as the sole respiratory quinone. The phylogenetic analyses and genomic comparisons, combined with phenotypic and chemotaxonomic features, strongly supported that the two strains should be classified as representing two novel species of the genus Psychromonas, for which we propose the names Psychromonas algicola sp. nov. (type strain RZ5T=JCM 33153T=MCCC 1H00360T) and Psychromonas algarum sp. nov. (type strain RZ22T=JCM 33154T=MCCC 1H00361T).

从红藻(Grateloupia sp.)中分离到的两种新细菌——藻冷单胞菌和藻冷单胞菌。
采用多相法对从某红藻样品中分离得到的2株革兰氏阴性菌RZ5T和2株杆状菌RZ22T进行了鉴定,以明确其分类位置。菌株RZ5T在4-33℃(最适25-28℃)、pH 6.5-8.5(最适7.0-8.0)和0.5-5.0% (w/v) NaCl(最适1.0%)条件下生长。菌株RZ22T在4-28℃(最适20-25℃)、pH 6.5-8.5(最适7.0-8.0)和2.0-5.0% (w/v) NaCl(最适3.0%)条件下生长。菌株RZ5T有鞭毛,具有活动能力,菌株RZ22T没有鞭毛,不具有活动能力。基于16S rRNA基因序列的系统发育分析表明,两株分离株均属于冷单胞菌属,与菌株RZ5T和RZ22T的水冷单胞菌M1A1T(98.1%)和南极冷单胞菌DSM 10704T(97.1%)亲缘关系最为密切。两菌株的优势脂肪酸均为C16: 0和特征3 (C16: 1 ω7c/C16: 1 ω6c)。菌株RZ5T的极性脂质主要为磷脂酰乙醇胺(PE)和糖脂(GLs),菌株RZ22T的极性脂质主要为PE、二磷脂酰甘油和GLs。菌株RZ5T和RZ22T的平均nt同一性(ANI)和数字DNA-DNA杂交(dDDH)值分别为85.4%和18.9%。菌株RZ5T对冷单胞菌属的ANI值为84.3 ~ 85.5%,dDDH值为18.3 ~ 21.3%。菌株RZ22T对冷单胞菌属的ANI值为84.2 ~ 85.2%,dDDH值为18.4 ~ 22.1%。菌株RZ5T和RZ22T基因组DNA的G+C含量分别为36.7 mol%和35.6 mol%。菌株RZ5T和RZ22T唯一含有的呼吸醌为泛醌-8。系统发育分析和基因组学比较,结合表型和化学分类特征,有力地支持这两株菌株应该被归类为两个新属,我们建议将其命名为algicola sp. 11 .(型菌株RZ5T=JCM 33153T=MCCC 1H00360T)和algarum sp. 11 .(型菌株RZ22T=JCM 33154T=MCCC 1H00361T)。
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来源期刊
CiteScore
5.20
自引率
21.40%
发文量
426
审稿时长
1 months
期刊介绍: Published by the Microbiology Society and owned by the International Committee on Systematics of Prokaryotes (ICSP), a committee of the Bacteriology and Applied Microbiology Division of the International Union of Microbiological Societies, International Journal of Systematic and Evolutionary Microbiology is the leading forum for the publication of novel microbial taxa and the ICSP’s official journal of record for prokaryotic names. The journal welcomes high-quality research on all aspects of microbial evolution, phylogenetics and systematics, encouraging submissions on all prokaryotes, yeasts, microfungi, protozoa and microalgae across the full breadth of systematics including: Identification, characterisation and culture preservation Microbial evolution and biodiversity Molecular environmental work with strong taxonomic or evolutionary content Nomenclature Taxonomy and phylogenetics.
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