A β-1,2-glucan-associated glycoside hydrolase family 1 β-glucosidase from Streptomyces griseus.

IF 5.2 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Protein Science Pub Date : 2025-09-01 DOI:10.1002/pro.70255
Haruto Kumakura, Sei Motouchi, Kaito Kobayashi, Miyu Inoue, Natsuki Kariuda, Hiroyuki Nakai, Masahiro Nakajima
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引用次数: 0

Abstract

β-Glucosidases, major enzymes that release glucose from various natural compounds, are phylogenetically classified into glycoside hydrolase (GH) families. GH1 is the largest of these families. No β-1,2-glucan-associated GH1 enzyme has been found, even though β-1,2-glucans are natural carbohydrates that are important for interaction between organisms and environmental adaptation. In this study, functional and structural analyses of a GH1 enzyme from Streptomyces griseus (SGR_2426 protein) were performed. SGR_2426 showed the highest hydrolytic activity toward p-nitrophenyl β-glucopyranoside among p-nitrophenyl sugars. This enzyme showed hydrolytic activity toward β-1,2-glucooligosaccharides specifically among β-linked glucooligosaccharides. A structure of the enzyme in complex with sophorose (β-1,2-glucodisaccharide) was obtained as a Michaelis complex. The six-membered ring of the glucose unit at the reducing end of sophorose is positioned in a hydrophobic environment between Trp291 and Met171, while only residue Gln229 forms a hydrogen bond directly. Trp291 and Gln229 are proposed as candidates for the residues important for substrate specificity based on comparison with structurally characterized GH1 homologs. Mutational analysis of Trp291 and Gln229 suggested that Trp291 is important for substrate recognition but not for substrate specificity and that Gln229 is involved in substrate specificity. SGR_2426 is the first identified β-1,2-glucan-associated β-glucosidase in the GH1 family.

来自灰色链霉菌的β-1,2-葡聚糖相关糖苷水解酶家族1 β-葡萄糖苷酶。
β-葡萄糖苷酶是从各种天然化合物中释放葡萄糖的主要酶,在系统发育上可分为糖苷水解酶(GH)家族。GH1是这些家族中最大的。尽管β-1,2-葡聚糖是一种天然碳水化合物,对生物体之间的相互作用和环境适应非常重要,但尚未发现β-1,2-葡聚糖相关的GH1酶。本研究对灰色链霉菌的GH1酶(SGR_2426蛋白)进行了功能和结构分析。在对硝基苯糖中,SGR_2426对对硝基苯β-葡萄糖苷的水解活性最高。该酶对β-1,2-低聚葡萄糖具有水解活性,特别是在β-连接的低聚葡萄糖中。该酶与槐糖(β-1,2-葡萄糖二糖)的配合物结构为Michaelis配合物。蔗糖还原端葡萄糖单元的六元环位于Trp291和Met171之间的疏水环境中,只有残基Gln229直接形成氢键。基于与结构表征的GH1同源物的比较,Trp291和Gln229被认为是对底物特异性重要的残基的候选者。Trp291和Gln229的突变分析表明,Trp291对底物识别很重要,但对底物特异性不重要,Gln229参与底物特异性。SGR_2426是GH1家族中首次发现的β-1,2-葡聚糖相关β-葡萄糖苷酶。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Protein Science
Protein Science 生物-生化与分子生物学
CiteScore
12.40
自引率
1.20%
发文量
246
审稿时长
1 months
期刊介绍: Protein Science, the flagship journal of The Protein Society, is a publication that focuses on advancing fundamental knowledge in the field of protein molecules. The journal welcomes original reports and review articles that contribute to our understanding of protein function, structure, folding, design, and evolution. Additionally, Protein Science encourages papers that explore the applications of protein science in various areas such as therapeutics, protein-based biomaterials, bionanotechnology, synthetic biology, and bioelectronics. The journal accepts manuscript submissions in any suitable format for review, with the requirement of converting the manuscript to journal-style format only upon acceptance for publication. Protein Science is indexed and abstracted in numerous databases, including the Agricultural & Environmental Science Database (ProQuest), Biological Science Database (ProQuest), CAS: Chemical Abstracts Service (ACS), Embase (Elsevier), Health & Medical Collection (ProQuest), Health Research Premium Collection (ProQuest), Materials Science & Engineering Database (ProQuest), MEDLINE/PubMed (NLM), Natural Science Collection (ProQuest), and SciTech Premium Collection (ProQuest).
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