Elucidating the effects of Fisetin on hALDH4 activity and stability: A multidisciplinary approach using spectroscopy and molecular dynamics simulations.

IF 1.7 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Ayodele O Kolawole, Mary Ayoola Bukoye, Adejoke N Kolawole, Babatunde A Falese, Showkat Ahmad Mir, Binata Nayak
{"title":"Elucidating the effects of Fisetin on hALDH4 activity and stability: A multidisciplinary approach using spectroscopy and molecular dynamics simulations.","authors":"Ayodele O Kolawole, Mary Ayoola Bukoye, Adejoke N Kolawole, Babatunde A Falese, Showkat Ahmad Mir, Binata Nayak","doi":"10.1093/jb/mvaf053","DOIUrl":null,"url":null,"abstract":"<p><p>Human Aldehyde Dehydrogenase IV (hALDH4) role in the metabolism of aldehydic compounds is apodictic. Fisetin, a bioactive flavonoid, having myriad of pharmacological activities with inexhaustible therapeutic potentials. Howbeit, the interactive mechanism and inhibitory potential of fisetin on hALDH4 still remain unclear and untold. Here, multi spectroscopic technique, molecular modelling and dynamic simulations were comprehensively explored to elucidate this. Fisetin quenching the intrinsic fluorescence of hALDH4. Fisetin showed a significant inhibitory effect on the hALDH4 (IC50 = 17.45 μM) with kinetic inhibition constant, KI, of 25.97 μM. It reversibly inhibited the enzyme in a mixed competitive manner. The interaction, though predominantly electrostatic interaction, perturbed the intrinsic hALDH4 conformation by compromising the predominant α-helix structure. hALDH4 has one ligand competent site for fisetin with a binding constant (Ka) of 3.80 x 104 L.mol-1 at 25°C. The molecular docking and atomistic simulations demonstrated affinity of fisetin for hALDH4 causing the protein structural strain, resulting in unusual conformations but stable. This investigation provided important insights on kinetics and thermodynamics of fisetin and hALDH4 interaction shedding light on the potential treatment of hALDH-implicated pathological conditions.</p>","PeriodicalId":15234,"journal":{"name":"Journal of biochemistry","volume":" ","pages":""},"PeriodicalIF":1.7000,"publicationDate":"2025-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of biochemistry","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1093/jb/mvaf053","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Human Aldehyde Dehydrogenase IV (hALDH4) role in the metabolism of aldehydic compounds is apodictic. Fisetin, a bioactive flavonoid, having myriad of pharmacological activities with inexhaustible therapeutic potentials. Howbeit, the interactive mechanism and inhibitory potential of fisetin on hALDH4 still remain unclear and untold. Here, multi spectroscopic technique, molecular modelling and dynamic simulations were comprehensively explored to elucidate this. Fisetin quenching the intrinsic fluorescence of hALDH4. Fisetin showed a significant inhibitory effect on the hALDH4 (IC50 = 17.45 μM) with kinetic inhibition constant, KI, of 25.97 μM. It reversibly inhibited the enzyme in a mixed competitive manner. The interaction, though predominantly electrostatic interaction, perturbed the intrinsic hALDH4 conformation by compromising the predominant α-helix structure. hALDH4 has one ligand competent site for fisetin with a binding constant (Ka) of 3.80 x 104 L.mol-1 at 25°C. The molecular docking and atomistic simulations demonstrated affinity of fisetin for hALDH4 causing the protein structural strain, resulting in unusual conformations but stable. This investigation provided important insights on kinetics and thermodynamics of fisetin and hALDH4 interaction shedding light on the potential treatment of hALDH-implicated pathological conditions.

阐明非塞汀对hALDH4活性和稳定性的影响:使用光谱和分子动力学模拟的多学科方法。
人醛脱氢酶IV (hALDH4)在醛类化合物代谢中的作用是绝对的。非瑟酮是一种生物活性类黄酮,具有多种药理活性,具有取之不尽的治疗潜力。然而,非瑟酮对hALDH4的相互作用机制和抑制潜力尚不清楚。本文综合运用多光谱技术、分子模拟和动态模拟等方法来阐明这一点。非瑟酮猝灭hALDH4的固有荧光。非西汀对hALDH4有明显的抑制作用(IC50 = 17.45 μM),动力学抑制常数KI为25.97 μM。它以混合竞争的方式可逆地抑制酶。这种相互作用,虽然主要是静电相互作用,但通过破坏主要的α-螺旋结构,扰乱了hALDH4的固有构象。hALDH4具有一个非瑟酮配体胜任位点,在25°C时结合常数(Ka)为3.80 x 104 l mol-1。分子对接和原子模拟表明,非瑟酮对hALDH4具有亲和力,导致蛋白结构应变,形成异常构象,但稳定。这项研究为非瑟酮和hALDH4相互作用的动力学和热力学提供了重要的见解,揭示了hALDH4相关病理条件的潜在治疗方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Journal of biochemistry
Journal of biochemistry 生物-生化与分子生物学
CiteScore
4.80
自引率
3.70%
发文量
101
审稿时长
4-8 weeks
期刊介绍: The Journal of Biochemistry founded in 1922 publishes the results of original research in the fields of Biochemistry, Molecular Biology, Cell, and Biotechnology written in English in the form of Regular Papers or Rapid Communications. A Rapid Communication is not a preliminary note, but it is, though brief, a complete and final publication. The materials described in Rapid Communications should not be included in a later paper. The Journal also publishes short reviews (JB Review) and papers solicited by the Editorial Board.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信