Impact of pH and salinity fluctuations on oxidation of Fe(II) by nitrate-reducing microorganisms enriched from the reduced tidal sediment of an extreme acidic river (Río Tinto, Spain).

IF 3.2 3区 生物学 Q2 MICROBIOLOGY
Martina Bottaro, Sergey Abramov, Ricardo Amils, Daniel Straub, Sebastian Kühnel, Marie Mollenkopf, Sara Kleindienst, Martin Obst, Andreas Kappler
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Abstract

Nitrate reduction coupled to Fe(II) oxidation (NRFeOx) contributes to Fe cycling in the estuarian sediments of the Río Tinto river (Huelva, Spain). However, it is not yet known (i) whether and which NRFeOx microorganisms can be enriched from the reduced sediment layer and (ii) how in situ pH and salinity fluctuations affect NRFeOx. Therefore, we (i) used two different approaches, such as microcosm experiments (sediment amended with either NO3-/Fe2+aq or acetate/NO3-/Fe2+aq) and enrichment cultures (medium amended with acetate/NO3-/Fe2+aq) to enrich NRFeOx microorganisms to (ii) test their salinity and pH tolerance under simulated high tide and low tide conditions. We found that different microorganisms such as Thiobacillus (up to 9.7 ± 5.8% DNA-based 16S rRNA gene abundance) and Denitromonas (83.6% DNA-based 16S rRNA gene abundance) were contributing to NRFeOx in the microcosm experiments and enrichment culture approach, respectively. The strong buffering capacity of the native sediment and the presence of additional organic carbon as acetate can favor NRFeOx microorganisms during acidic water influx (low tide) events. The ∼100% conversion of NO3- to NO₂- under high tide conditions was observed both in the enrichment cultures and microcosm experiment when acetate was added suggesting the chemodenitrification may be the primary Fe(II) oxidation pathway under salty conditions.

pH和盐度波动对来自极酸性河流的还原潮汐沉积物的硝酸盐还原微生物氧化铁(II)的影响(Río Tinto,西班牙)。
硝酸还原耦合铁(II)氧化(NRFeOx)有助于Río Tinto河河口沉积物中的铁循环(Huelva, Spain)。然而,目前尚不清楚(i)是否以及哪些NRFeOx微生物可以从还原沉积物层中富集,以及(ii)原位pH和盐度波动如何影响NRFeOx。因此,我们(i)采用两种不同的方法,如微观环境实验(用NO3-/Fe2+aq或醋酸/NO3-/Fe2+aq改性的沉积物)和富集培养(用醋酸/NO3-/Fe2+aq改性的培养基)来富集NRFeOx微生物,(ii)测试它们在模拟涨潮和退潮条件下的盐度和pH耐受性。我们发现不同的微生物,如硫杆菌(高达9.7±5.8%的dna -基16S rRNA基因丰度)和脱硝单胞菌(83.6%的dna -基16S rRNA基因丰度)分别在微生物实验和富集培养方法中贡献NRFeOx。原生沉积物的强大缓冲能力以及作为醋酸盐的额外有机碳的存在,在酸性水涌入(低潮)事件期间有利于NRFeOx微生物。在富集培养和微观实验中,当添加乙酸盐时,在涨潮条件下NO3 -发展为NO - 2 -的⁓100%的转化表明,化学反硝化可能是盐条件下Fe(II)氧化的主要途径。
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来源期刊
FEMS microbiology ecology
FEMS microbiology ecology 生物-微生物学
CiteScore
7.50
自引率
2.40%
发文量
132
审稿时长
3 months
期刊介绍: FEMS Microbiology Ecology aims to ensure efficient publication of high-quality papers that are original and provide a significant contribution to the understanding of microbial ecology. The journal contains Research Articles and MiniReviews on fundamental aspects of the ecology of microorganisms in natural soil, aquatic and atmospheric habitats, including extreme environments, and in artificial or managed environments. Research papers on pure cultures and in the areas of plant pathology and medical, food or veterinary microbiology will be published where they provide valuable generic information on microbial ecology. Papers can deal with culturable and non-culturable forms of any type of microorganism: bacteria, archaea, filamentous fungi, yeasts, protozoa, cyanobacteria, algae or viruses. In addition, the journal will publish Perspectives, Current Opinion and Controversy Articles, Commentaries and Letters to the Editor on topical issues in microbial ecology. - Application of ecological theory to microbial ecology - Interactions and signalling between microorganisms and with plants and animals - Interactions between microorganisms and their physicochemical enviornment - Microbial aspects of biogeochemical cycles and processes - Microbial community ecology - Phylogenetic and functional diversity of microbial communities - Evolutionary biology of microorganisms
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