Diversity analysis of phytase-producing bacteria from coastal seawater and sediment and characterization of their phytases

Xiao-Jie Yuan , Rui Liu , Jian Li , Wen-Xiao Zhao , Hui-Hui Fu , Yan-Rong Zhou , Mei-Ling Sun , Xiu-Lan Chen , Yu-Qiang Zhang
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Abstract

Phytic acid, also known as inositol hexaphosphate (IP6), is one of the most abundant organophosphorus compounds in nature. Its degradation by phytase plays a key role in the natural phosphorus cycle. In addition, phytases are widely used in livestock and poultry feed to enhance phosphorus utilization. While most reported and commercial phytases are derived from terrestrial organisms, relatively few originate from marine microorganisms, and information on the diversity of phytase-producing marine bacteria remains limited. In this study, following enrichment with sodium phytate, we analyzed the bacterial diversity in seawater and sediment samples collected from the coast of Aoshan Bay in Qingdao, China, using 16S rRNA gene amplicon sequencing. A total of 138 OTUs representing 10 phyla, 15 classes, 37 orders, 55 families, and 70 genera were identified. Furthermore, 27 phytase-producing bacterial strains were isolated from the enrichment cultures, primarily belonging to the phyla Firmicutes (14/27) and Proteobacteria (12/27). Five extracellular phytase genes were identified through genome sequencing of three representative strains. These phytases were subsequently expressed and characterized. All were classified as histidine acid phosphatase-type phytases, exhibiting optimal activity at temperatures of 50–60 °C and pH values of 4.0–5.0. Notably, phytase 3919 showed a specific activity as high as 2485.25 U/mg, indicating strong potential for practical applications. This study provides insight into the diversity of coastal bacteria involved in phytic acid degradation, contributing to our understanding of bacterial-driven phosphorus cycling in coastal ecosystems and facilitating the discovery of phytases with industrial potential.

Abstract Image

沿海海水和沉积物中产植酸菌的多样性分析及其产植酸酶的特性
植酸又称六磷酸肌醇(IP6),是自然界中含量最丰富的有机磷化合物之一。其被植酸酶降解在自然磷循环中起着关键作用。此外,植酸酶被广泛应用于畜禽饲料中,以提高磷的利用率。虽然大多数报告的和商业化的植酸酶来自陆生生物,但来自海洋微生物的植酸酶相对较少,而且关于产生植酸酶的海洋细菌多样性的资料仍然有限。本研究采用植酸钠富集后,利用16S rRNA基因扩增子测序技术,分析了青岛敖山湾沿岸海水和沉积物样品中的细菌多样性。共鉴定出138个otu,隶属10门15纲37目55科70属。此外,从富集培养中分离到27株产植酸酶的细菌,主要属于厚壁菌门(14/27)和变形菌门(12/27)。通过对3株代表性菌株的基因组测序,鉴定出5个细胞外植酸酶基因。这些植酸酶随后被表达和表征。所有植酸酶均为组氨酸酸性磷酸酶型,在温度为50 ~ 60℃,pH值为4.0 ~ 5.0时具有最佳活性。其中,植酸酶3919的比活性高达2485.25 U/mg,具有较强的应用潜力。本研究揭示了参与植酸降解的沿海细菌的多样性,有助于我们了解沿海生态系统中细菌驱动的磷循环,并促进具有工业潜力的植酸酶的发现。
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