{"title":"Scattering reduced imaging of spheroids via refractive index estimation and shift-variant deconvolution.","authors":"Yoshimasa Suzuki, Shintaro Fujii, Satoshi Watanabe, Shinichi Hayashi","doi":"10.1364/BOE.569674","DOIUrl":null,"url":null,"abstract":"<p><p>Confocal laser scanning microscopy (CLSM) is widely used in biological research, but imaging the deep regions of three-dimensional samples like spheroids is challenging due to scattering. We propose a computational method that estimates the refractive index distribution from CLSM images, calculates position-dependent point-spread functions (PSFs) using a multi-diffraction propagation model for both excitation and emission light, and applies shift-variant deconvolution. This approach enables the resolution of deep spheroid structures that could not be resolved in conventional CLSM images. It requires no hardware modifications to conventional CLSM systems, enabling high-quality three-dimensional imaging of scattering samples using conventional equipment.</p>","PeriodicalId":8969,"journal":{"name":"Biomedical optics express","volume":"16 8","pages":"3437-3453"},"PeriodicalIF":3.2000,"publicationDate":"2025-07-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12339319/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biomedical optics express","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1364/BOE.569674","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/8/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
Confocal laser scanning microscopy (CLSM) is widely used in biological research, but imaging the deep regions of three-dimensional samples like spheroids is challenging due to scattering. We propose a computational method that estimates the refractive index distribution from CLSM images, calculates position-dependent point-spread functions (PSFs) using a multi-diffraction propagation model for both excitation and emission light, and applies shift-variant deconvolution. This approach enables the resolution of deep spheroid structures that could not be resolved in conventional CLSM images. It requires no hardware modifications to conventional CLSM systems, enabling high-quality three-dimensional imaging of scattering samples using conventional equipment.
期刊介绍:
The journal''s scope encompasses fundamental research, technology development, biomedical studies and clinical applications. BOEx focuses on the leading edge topics in the field, including:
Tissue optics and spectroscopy
Novel microscopies
Optical coherence tomography
Diffuse and fluorescence tomography
Photoacoustic and multimodal imaging
Molecular imaging and therapies
Nanophotonic biosensing
Optical biophysics/photobiology
Microfluidic optical devices
Vision research.