Differential microRNA profiling of the Marshallese population in Arkansas reveals a higher association with chronic diseases.

IF 2.6 3区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
PLoS ONE Pub Date : 2025-08-11 eCollection Date: 2025-01-01 DOI:10.1371/journal.pone.0329321
Gohar Azhar, Ambika Verma, Pankaj Patyal, Wei Zhang, Shakshi Sharma, Patricia E Savary, Sheldon Riklon, Philmar Mendoza Kabua, Pearl A McElfish, Jeanne Y Wei
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引用次数: 0

Abstract

The Marshallese communities face disproportionately high prevalence of chronic diseases, including diabetes, obesity, cardiovascular disease, and inflammatory conditions. Differences in miRNA expression may contribute to investigate the potential risk of chronic diseases in Marshallese people. In this study, we used RNA isolated from blood samples of Marshallese participants that resides in Arkansas to perform miRNA expression profiling and differential expression analysis. Specifically, blood samples were collected from 47 Marshallese participants after obtaining written informed consent and were subjected to Illumina-based next-generation RNA sequencing. Using the miRBase database, we identified the miRNAs that were most significantly expressed based on log2 fold change values, applying a Bonferroni-corrected P-value threshold of < 0.01. We found that a total of 63 human miRNAs were differentially expressed in the Marshallese subjects, with 52 miRNAs significantly upregulated and 11 miRNAs downregulated in males compared with females. Notably, 2 miRNA families, hsa-miR-548 and hsa-let-7, were significantly upregulated in the Marshallese population and are known to play important roles in regulating inflammatory responses. Further analysis revealed the 25 miRNAs that had the largest significant difference in expression with a cutoff of 1.5 when comparing males with females. Among these, we observed that 7 miRNAs were upregulated, and 18 miRNAs were downregulated by greater than 1.5 log2 fold change in males versus females. Interestingly, upregulated expression of hsa-miR-548k in males and hsa-miR-496 in females were both associated with diabetes mellitus. Diabetes remains a major health concern in the Marshallese community and may accelerate comorbidities related to cardiovascular conditions and cognitive decline. Therefore, the specific roles of these miRNAs in relation to these health issues warrant further investigation.

阿肯色州马绍尔群岛人口的差异microRNA分析揭示了与慢性疾病的更高关联。
马绍尔社区的慢性病发病率高得不成比例,包括糖尿病、肥胖症、心血管疾病和炎症。miRNA表达的差异可能有助于调查马绍尔人慢性疾病的潜在风险。在这项研究中,我们使用从居住在阿肯色州的马绍尔参与者的血液样本中分离的RNA进行miRNA表达谱和差异表达分析。具体来说,在获得书面知情同意后,从47名马绍尔参与者中收集血液样本,并对其进行基于illumina的下一代RNA测序。使用miRBase数据库,我们根据log2倍变化值确定了最显著表达的mirna,应用bonferroni校正的p值阈值< 0.01。我们发现,共有63种人类mirna在马绍尔群岛受试者中差异表达,与女性相比,男性中有52种mirna显著上调,11种mirna下调。值得注意的是,2个miRNA家族,hsa-miR-548和hsa-let-7,在马绍尔群岛人群中显著上调,并且已知在调节炎症反应中发挥重要作用。进一步分析显示,25个mirna的表达差异最大,在雄性和雌性比较时,其截止值为1.5。其中,我们观察到7个mirna上调,18个mirna下调,男性与女性相比变化大于1.5 log2倍。有趣的是,男性中hsa-miR-548k和女性中hsa-miR-496的上调表达都与糖尿病有关。糖尿病仍然是马绍尔社区的一个主要健康问题,并可能加速与心血管疾病和认知能力下降有关的合并症。因此,这些mirna在这些健康问题中的具体作用值得进一步研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
PLoS ONE
PLoS ONE 生物-生物学
CiteScore
6.20
自引率
5.40%
发文量
14242
审稿时长
3.7 months
期刊介绍: PLOS ONE is an international, peer-reviewed, open-access, online publication. PLOS ONE welcomes reports on primary research from any scientific discipline. It provides: * Open-access—freely accessible online, authors retain copyright * Fast publication times * Peer review by expert, practicing researchers * Post-publication tools to indicate quality and impact * Community-based dialogue on articles * Worldwide media coverage
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