Cholesterol homeostasis and pathway enrichment in post-revascularization recovery.

IF 2.9 4区 医学 Q3 ENGINEERING, BIOMEDICAL
Syed Abdullah Basit, Nehad M Alajez, Tanvir Alam
{"title":"Cholesterol homeostasis and pathway enrichment in post-revascularization recovery.","authors":"Syed Abdullah Basit, Nehad M Alajez, Tanvir Alam","doi":"10.1186/s12938-025-01429-x","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Heart revascularization is a critical intervention for restoring myocardial perfusion in patients with ischemic cardiovascular disease. While the procedure alleviates ischemia, it also triggers systemic metabolic and transcriptional changes, particularly in lipid metabolism.</p><p><strong>Methods: </strong>In this pilot study, we utilized RNA-seq data from 4 revascularized patients and 5 control participants from the Qatar Biobank (QBB) to investigate the effects of revascularization on cholesterol biosynthesis and metabolic pathways. Differential gene expression analysis was performed to identify key regulatory genes, followed by pathway enrichment and Gene Ontology analyses.</p><p><strong>Results: </strong>Thirteen differentially expressed genes, including ABCG1, EBP, and LPCAT3, were identified as potentially involved in cholesterol regulation, lipid remodeling, and sterol metabolism. Notably, ABCG1, EBP, and LPCAT3 showed significant downregulation. Correlation analysis revealed strong associations between gene expression and clinical parameters, with ABCG1 expression negatively correlating with triglyceride levels (r = - 0.89, p = 0.001).</p><p><strong>Conclusion: </strong>This exploratory study provides preliminary evidence that heart revascularization may affect cholesterol-related metabolic pathways. While the small sample size (n = 4 revascularized patients) limits generalizability, these findings generate important hypotheses regarding post-revascularization metabolic adaptation and establish a foundation for larger validation studies. Future research with expanded cohorts is essential to confirm these preliminary observations and their therapeutic implications.</p>","PeriodicalId":8927,"journal":{"name":"BioMedical Engineering OnLine","volume":"24 1","pages":"98"},"PeriodicalIF":2.9000,"publicationDate":"2025-08-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12335785/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"BioMedical Engineering OnLine","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1186/s12938-025-01429-x","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
引用次数: 0

Abstract

Background: Heart revascularization is a critical intervention for restoring myocardial perfusion in patients with ischemic cardiovascular disease. While the procedure alleviates ischemia, it also triggers systemic metabolic and transcriptional changes, particularly in lipid metabolism.

Methods: In this pilot study, we utilized RNA-seq data from 4 revascularized patients and 5 control participants from the Qatar Biobank (QBB) to investigate the effects of revascularization on cholesterol biosynthesis and metabolic pathways. Differential gene expression analysis was performed to identify key regulatory genes, followed by pathway enrichment and Gene Ontology analyses.

Results: Thirteen differentially expressed genes, including ABCG1, EBP, and LPCAT3, were identified as potentially involved in cholesterol regulation, lipid remodeling, and sterol metabolism. Notably, ABCG1, EBP, and LPCAT3 showed significant downregulation. Correlation analysis revealed strong associations between gene expression and clinical parameters, with ABCG1 expression negatively correlating with triglyceride levels (r = - 0.89, p = 0.001).

Conclusion: This exploratory study provides preliminary evidence that heart revascularization may affect cholesterol-related metabolic pathways. While the small sample size (n = 4 revascularized patients) limits generalizability, these findings generate important hypotheses regarding post-revascularization metabolic adaptation and establish a foundation for larger validation studies. Future research with expanded cohorts is essential to confirm these preliminary observations and their therapeutic implications.

Abstract Image

Abstract Image

Abstract Image

血运重建后恢复中的胆固醇稳态和途径富集。
背景:心脏血运重建术是缺血性心血管疾病患者恢复心肌灌注的关键干预措施。虽然这一过程减轻了缺血,但它也引发了全身代谢和转录的变化,特别是脂质代谢。方法:在这项初步研究中,我们利用来自卡塔尔生物银行(QBB)的4名血运重建术患者和5名对照组的RNA-seq数据来研究血运重建术对胆固醇生物合成和代谢途径的影响。通过差异基因表达分析确定关键调控基因,然后进行途径富集和基因本体分析。结果:13个差异表达基因,包括ABCG1、EBP和LPCAT3,被确定可能参与胆固醇调节、脂质重塑和固醇代谢。值得注意的是,ABCG1、EBP和LPCAT3明显下调。相关分析显示,基因表达与临床参数之间存在较强的相关性,ABCG1表达与甘油三酯水平呈负相关(r = - 0.89, p = 0.001)。结论:本探索性研究为心脏血运重建可能影响胆固醇相关代谢途径提供了初步证据。虽然样本量小(n = 4例血运重建术患者)限制了通用性,但这些发现产生了关于血运重建术后代谢适应的重要假设,并为更大规模的验证研究奠定了基础。为了证实这些初步观察结果及其治疗意义,扩大队列的未来研究是必不可少的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
BioMedical Engineering OnLine
BioMedical Engineering OnLine 工程技术-工程:生物医学
CiteScore
6.70
自引率
2.60%
发文量
79
审稿时长
1 months
期刊介绍: BioMedical Engineering OnLine is an open access, peer-reviewed journal that is dedicated to publishing research in all areas of biomedical engineering. BioMedical Engineering OnLine is aimed at readers and authors throughout the world, with an interest in using tools of the physical and data sciences and techniques in engineering to understand and solve problems in the biological and medical sciences. Topical areas include, but are not limited to: Bioinformatics- Bioinstrumentation- Biomechanics- Biomedical Devices & Instrumentation- Biomedical Signal Processing- Healthcare Information Systems- Human Dynamics- Neural Engineering- Rehabilitation Engineering- Biomaterials- Biomedical Imaging & Image Processing- BioMEMS and On-Chip Devices- Bio-Micro/Nano Technologies- Biomolecular Engineering- Biosensors- Cardiovascular Systems Engineering- Cellular Engineering- Clinical Engineering- Computational Biology- Drug Delivery Technologies- Modeling Methodologies- Nanomaterials and Nanotechnology in Biomedicine- Respiratory Systems Engineering- Robotics in Medicine- Systems and Synthetic Biology- Systems Biology- Telemedicine/Smartphone Applications in Medicine- Therapeutic Systems, Devices and Technologies- Tissue Engineering
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信