Tao Huang , Xiaoqin Zang , Grigoriy Kondyukov , Zhangshuan Hou , Guanze Peng , Joachim Pander , Josef Knott , Juergen Geist , Meklit Berihun Melesse , Paul Jacobson , Zhiqun Daniel Deng
{"title":"Towards automated and real-time multi-object detection of anguilliform fishes from sonar data using YOLOv8 deep learning algorithm","authors":"Tao Huang , Xiaoqin Zang , Grigoriy Kondyukov , Zhangshuan Hou , Guanze Peng , Joachim Pander , Josef Knott , Juergen Geist , Meklit Berihun Melesse , Paul Jacobson , Zhiqun Daniel Deng","doi":"10.1016/j.ecoinf.2025.103381","DOIUrl":null,"url":null,"abstract":"<div><div>Freshwater eels (<em>Anguilla</em> spp.), including American eels (<em>Anguilla rostrata</em>), European eels (<em>Anguilla anguilla</em>), and Japanese eels (<em>Anguilla japonica</em>), are target species for conservation and of regulatory concern due to their vulnerability to various stressors during obligatory migrations from freshwater into oceanic spawning grounds. Accurate and efficient detection of migrating eels can improve our understanding of fish behaviors and fish-hydraulic structure interactions from both ecological and economic perspectives. However, a real-time and automated framework for detecting migrating eels in real-world applications is currently lacking. Leveraging imaging sonar as a reliable technology for fish passage monitoring in dark, turbid and high-flow environments, field data are acquired using imaging sonar and then converted to single sonar frames/images for subsequent analysis. In this study, a framework based on the “You Only Look Once” Version 8 (YOLOv8)-based convolutional neural network is proposed for multi-object detection of eels and non-eel fish using the sonar images after image subtraction and additional wavelet denoising. The results from both training and testing phases demonstrate that the framework's ability can successfully detect both eels and non-eel fish in preprocessed sonar images, achieving <em>F</em>1-scores and [email protected] exceeding 0.80. Additionally, the incorporation of wavelet denoising during preprocessing slightly improves detection performance. Furthermore, the transferability of this framework from eel to lamprey detection is demonstrated to be feasible given the similar morphological characteristics of these two species. Overall, the proposed framework achieves accurate and efficient detection of migrating eels, providing reliable and real-time information that can help conserve vulnerable eel and eel-like species and facilitate the design, operation, and optimization of more effective downstream passage facilities.</div></div>","PeriodicalId":51024,"journal":{"name":"Ecological Informatics","volume":"91 ","pages":"Article 103381"},"PeriodicalIF":7.3000,"publicationDate":"2025-08-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Ecological Informatics","FirstCategoryId":"93","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1574954125003905","RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ECOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Freshwater eels (Anguilla spp.), including American eels (Anguilla rostrata), European eels (Anguilla anguilla), and Japanese eels (Anguilla japonica), are target species for conservation and of regulatory concern due to their vulnerability to various stressors during obligatory migrations from freshwater into oceanic spawning grounds. Accurate and efficient detection of migrating eels can improve our understanding of fish behaviors and fish-hydraulic structure interactions from both ecological and economic perspectives. However, a real-time and automated framework for detecting migrating eels in real-world applications is currently lacking. Leveraging imaging sonar as a reliable technology for fish passage monitoring in dark, turbid and high-flow environments, field data are acquired using imaging sonar and then converted to single sonar frames/images for subsequent analysis. In this study, a framework based on the “You Only Look Once” Version 8 (YOLOv8)-based convolutional neural network is proposed for multi-object detection of eels and non-eel fish using the sonar images after image subtraction and additional wavelet denoising. The results from both training and testing phases demonstrate that the framework's ability can successfully detect both eels and non-eel fish in preprocessed sonar images, achieving F1-scores and [email protected] exceeding 0.80. Additionally, the incorporation of wavelet denoising during preprocessing slightly improves detection performance. Furthermore, the transferability of this framework from eel to lamprey detection is demonstrated to be feasible given the similar morphological characteristics of these two species. Overall, the proposed framework achieves accurate and efficient detection of migrating eels, providing reliable and real-time information that can help conserve vulnerable eel and eel-like species and facilitate the design, operation, and optimization of more effective downstream passage facilities.
期刊介绍:
The journal Ecological Informatics is devoted to the publication of high quality, peer-reviewed articles on all aspects of computational ecology, data science and biogeography. The scope of the journal takes into account the data-intensive nature of ecology, the growing capacity of information technology to access, harness and leverage complex data as well as the critical need for informing sustainable management in view of global environmental and climate change.
The nature of the journal is interdisciplinary at the crossover between ecology and informatics. It focuses on novel concepts and techniques for image- and genome-based monitoring and interpretation, sensor- and multimedia-based data acquisition, internet-based data archiving and sharing, data assimilation, modelling and prediction of ecological data.