Blood virome profiling reveals subtype-specific viral signatures and reduced diversity in non-Hodgkin lymphoma.

IF 5.4 1区 农林科学 Q1 IMMUNOLOGY
Virulence Pub Date : 2025-12-01 Epub Date: 2025-08-17 DOI:10.1080/21505594.2025.2542457
Shaokun Pan, Wang Li, Xingyue Zhao, Huijie Wang, Jing Liu, Wen Zhang, Chenglin Zhou, Youhua Xie
{"title":"Blood virome profiling reveals subtype-specific viral signatures and reduced diversity in non-Hodgkin lymphoma.","authors":"Shaokun Pan, Wang Li, Xingyue Zhao, Huijie Wang, Jing Liu, Wen Zhang, Chenglin Zhou, Youhua Xie","doi":"10.1080/21505594.2025.2542457","DOIUrl":null,"url":null,"abstract":"<p><p>Non-Hodgkin lymphoma (NHL), a heterogeneous lymphoid malignancy, demonstrates molecular diversity linked to genetic and immune factors, with emerging roles for viral infections in pathogenesis. Yet, the blood virome's composition and dynamics in NHL remain poorly characterized. This study characterizes the blood virome in NHL subtypes using viral metagenomic sequencing of serum from 217 patients (B-cell: BCL, T-cell: TCL, NK-cell: NKCL) and 40 healthy controls. Bioinformatic analysis identified 45 viral families, revealing subtype-specific viromic signatures. BCL exhibited a dominance of <i>Anelloviridae</i>, which accounted for 86% of eukaryotic viruses, compared with only 3% in controls, correlating with immunosuppression. Additionally, picobirnavirus, an opportunistic pathogen particularly in hosts with compromised immune systems, also showed a significant difference compared to controls. NKCL showed <i>Flaviviridae</i> enrichment, accounting for 82% of eukaryotic viruses, with nearly all of them being human pegivirus-1 (HPgV-1). Compared with healthy controls, patients with NHL exhibited significantly lower blood virome α-diversity at the genus level, and T-cell lymphomas showed the lowest species-level richness (140 vs. 332 in controls). Beta diversity highlighted BCL-specific viral heterogeneity, contrasting conserved T/NKCL viral profiles. <i>Anelloviridae</i> and Picobirnavirus expansion aligns with immune dysfunction, whereas NKCL-restricted HPgV-1 prevalence underscores biomarker potential. These findings implicate blood virome alterations marked by viral family predominance and diversity loss in NHL pathogenesis via immune modulation or oncogenesis. This first comprehensive NHL virome profile identifies subtype-specific signatures (<i>Anelloviridae</i>/Picobirnavirus/HPgV-1) for potential diagnostic and therapeutic targeting. Validation of these biomarkers may refine NHL subtyping and elucidate virome-lymphomagenesis mechanisms.</p>","PeriodicalId":23747,"journal":{"name":"Virulence","volume":" ","pages":"2542457"},"PeriodicalIF":5.4000,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12363502/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Virulence","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/21505594.2025.2542457","RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/8/17 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"IMMUNOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Non-Hodgkin lymphoma (NHL), a heterogeneous lymphoid malignancy, demonstrates molecular diversity linked to genetic and immune factors, with emerging roles for viral infections in pathogenesis. Yet, the blood virome's composition and dynamics in NHL remain poorly characterized. This study characterizes the blood virome in NHL subtypes using viral metagenomic sequencing of serum from 217 patients (B-cell: BCL, T-cell: TCL, NK-cell: NKCL) and 40 healthy controls. Bioinformatic analysis identified 45 viral families, revealing subtype-specific viromic signatures. BCL exhibited a dominance of Anelloviridae, which accounted for 86% of eukaryotic viruses, compared with only 3% in controls, correlating with immunosuppression. Additionally, picobirnavirus, an opportunistic pathogen particularly in hosts with compromised immune systems, also showed a significant difference compared to controls. NKCL showed Flaviviridae enrichment, accounting for 82% of eukaryotic viruses, with nearly all of them being human pegivirus-1 (HPgV-1). Compared with healthy controls, patients with NHL exhibited significantly lower blood virome α-diversity at the genus level, and T-cell lymphomas showed the lowest species-level richness (140 vs. 332 in controls). Beta diversity highlighted BCL-specific viral heterogeneity, contrasting conserved T/NKCL viral profiles. Anelloviridae and Picobirnavirus expansion aligns with immune dysfunction, whereas NKCL-restricted HPgV-1 prevalence underscores biomarker potential. These findings implicate blood virome alterations marked by viral family predominance and diversity loss in NHL pathogenesis via immune modulation or oncogenesis. This first comprehensive NHL virome profile identifies subtype-specific signatures (Anelloviridae/Picobirnavirus/HPgV-1) for potential diagnostic and therapeutic targeting. Validation of these biomarkers may refine NHL subtyping and elucidate virome-lymphomagenesis mechanisms.

血液病毒分析揭示了非霍奇金淋巴瘤的亚型特异性病毒特征和多样性降低。
非霍奇金淋巴瘤(NHL)是一种异质性淋巴细胞恶性肿瘤,其表现出与遗传和免疫因素相关的分子多样性,并在病毒感染的发病机制中发挥了新的作用。然而,在NHL中,血液病毒的组成和动态特征仍然很差。本研究对217名患者(b细胞:BCL, t细胞:TCL, nk细胞:NKCL)和40名健康对照者的血清进行病毒宏基因组测序,以表征NHL亚型的血液病毒组。生物信息学分析鉴定了45个病毒家族,揭示了亚型特异性的病毒学特征。BCL表现出无球病毒科的优势,占真核病毒的86%,而对照组只有3%,这与免疫抑制有关。此外,小核糖核酸病毒(一种机会性病原体,特别是在免疫系统受损的宿主中)与对照组相比也显示出显著差异。NKCL富集黄病毒科,占真核病毒总数的82%,其中几乎全部为人pegivirus-1 (HPgV-1)。与健康对照组相比,NHL患者的血病毒α-多样性在属水平上明显降低,t细胞淋巴瘤患者的血病毒α-多样性在属水平上最低(140比332)。β多样性突出了bcl特异性病毒异质性,与保守的T/NKCL病毒谱形成对比。无球病毒科和小核糖核酸病毒的扩增与免疫功能障碍一致,而nkcl限制的hpv -1患病率强调了生物标志物的潜力。这些发现暗示,在NHL的发病机制中,通过免疫调节或肿瘤发生,以病毒家族优势和多样性丧失为标志的血液病毒改变。这是第一个全面的NHL病毒谱,确定了亚型特异性特征(无球病毒科/小核糖核酸病毒/HPgV-1),用于潜在的诊断和治疗靶向。这些生物标志物的验证可以完善NHL亚型,阐明病毒组淋巴瘤发生机制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Virulence
Virulence IMMUNOLOGY-MICROBIOLOGY
CiteScore
9.20
自引率
1.90%
发文量
123
审稿时长
6-12 weeks
期刊介绍: Virulence is a fully open access peer-reviewed journal. All articles will (if accepted) be available for anyone to read anywhere, at any time immediately on publication. Virulence is the first international peer-reviewed journal of its kind to focus exclusively on microbial pathogenicity, the infection process and host-pathogen interactions. To address the new infectious challenges, emerging infectious agents and antimicrobial resistance, there is a clear need for interdisciplinary research.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信