Assessment of Pediatric Hypertriglyceridemia Etiology: Insights from Next-Generation Sequencing Panels and Identification of Novel Variants.

IF 1.6 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Ozlem Anlas, Fatma Derya Bulut
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引用次数: 0

Abstract

Hypertriglyceridemia is mostly associated with secondary conditions in children but can also result from monogenic disorders. The most prevalent genes identified as the underlying reason for impaired clearance of triglycerides from plasma by genome-wide association studies are the LPL, APOC2, APOA5, LMF1, APOE and GPIHBP1 genes. In this study, 26 pediatric patients with primary hypertriglyceridemia, 12 of whom were severe, were screened for monogenic causes via a next-generation sequencing panel that included 25 genes, namely, ABCA1, ABCG5, ABCG8, ANGPTL3, APOA1, APOA5, APOB, APOC2, APOC3, APOE, CETP, GPD1, GPIHBP1, LCAT, LDLR, LDLRAP1, LIPA, LIPC, LMF1, LPL, MTTP, NPC1L1, OSBPL5, PCSK9 and SAR1B. Additional findings, such as positive family history, hepatomegaly, splenomegaly, history of acute pancreatitis, hepatosteatosis, and atherosclerotic cardiovascular disease, were recorded. Twenty different variants, 16 of which were novel, were detected. Among these, six of the eight clinically significant mutations detected in the LPL, GPD1, GPIHBP1, APOC2, and LIPC genes were novel mutations. At least one variant was identified in 17 of 26 patients (65.4%), whereas no variants were detected in 9 patients (34.6%). Clinically significant variants that could explain the clinical findings were detected in 7 (58.3%) of the 12 patients with severe hypertriglyceridemia. In 4 out of the 6 patients with a familial history of hypertriglyceridemia, we identified pathogenic variants in the GPD1, LIPC, LPL and APOC2 genes, which are associated with hypertriglyceridemia. Targeting gene panels for suspected monogenic hypertriglyceridemia is a promising way to identify the underlying etiology, which enables genetic counseling and family screening to identify new patients and provides a personalized treatment approach.

儿童高甘油三酯血症病因评估:来自下一代测序小组和新变体鉴定的见解。
高甘油三酯血症主要与儿童继发性疾病有关,但也可能由单基因疾病引起。全基因组关联研究发现,导致血浆中甘油三酯清除受损的最常见基因是LPL、APOC2、APOA5、LMF1、APOE和GPIHBP1基因。本研究对26例原发性高甘油三酯血症患儿进行单基因筛查,其中12例为重症患儿,采用新一代测序技术,包括ABCA1、ABCG5、ABCG8、ANGPTL3、APOA1、APOA5、APOB、APOC2、APOC3、APOE、CETP、GPD1、GPIHBP1、LCAT、LDLR、LDLRAP1、LIPA、LIPC、LMF1、LPL、MTTP、NPC1L1、OSBPL5、PCSK9和SAR1B等25个基因。记录了其他发现,如阳性家族史、肝肿大、脾肿大、急性胰腺炎、肝纤维化和动脉粥样硬化性心血管疾病史。他们发现了20种不同的变异,其中16种是新的。其中,在LPL、GPD1、GPIHBP1、APOC2和LIPC基因中检测到的8个具有临床意义的突变中,有6个是新突变。26例患者中有17例(65.4%)至少鉴定出一种变异,而9例(34.6%)未检测到变异。在12例严重高甘油三酯血症患者中,有7例(58.3%)检测到可以解释临床结果的临床显著变异。在6例高甘油三酯血症家族史患者中的4例中,我们发现了GPD1、LIPC、LPL和APOC2基因的致病变异,这些基因与高甘油三酯血症相关。针对疑似单基因高甘油三酯血症的基因面板是确定潜在病因的一种有希望的方法,它使遗传咨询和家庭筛查能够识别新患者,并提供个性化的治疗方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Biochemical Genetics
Biochemical Genetics 生物-生化与分子生物学
CiteScore
3.90
自引率
0.00%
发文量
133
审稿时长
4.8 months
期刊介绍: Biochemical Genetics welcomes original manuscripts that address and test clear scientific hypotheses, are directed to a broad scientific audience, and clearly contribute to the advancement of the field through the use of sound sampling or experimental design, reliable analytical methodologies and robust statistical analyses. Although studies focusing on particular regions and target organisms are welcome, it is not the journal’s goal to publish essentially descriptive studies that provide results with narrow applicability, or are based on very small samples or pseudoreplication. Rather, Biochemical Genetics welcomes review articles that go beyond summarizing previous publications and create added value through the systematic analysis and critique of the current state of knowledge or by conducting meta-analyses. Methodological articles are also within the scope of Biological Genetics, particularly when new laboratory techniques or computational approaches are fully described and thoroughly compared with the existing benchmark methods. Biochemical Genetics welcomes articles on the following topics: Genomics; Proteomics; Population genetics; Phylogenetics; Metagenomics; Microbial genetics; Genetics and evolution of wild and cultivated plants; Animal genetics and evolution; Human genetics and evolution; Genetic disorders; Genetic markers of diseases; Gene technology and therapy; Experimental and analytical methods; Statistical and computational methods.
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