Optimization of deep learning–based denoising for arterial spin labeling: Effects of averaging and training strategies

IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
Jia Guo, Arun Sharma, Greg Zaharchuk, Hossein Rahimzadeh, Naveed Ilyas
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引用次数: 0

Abstract

Purpose

Systematic study of the effects of averaging and other relevant training strategies in deep learning (DL)–based denoising is required to optimize such processing pipelines for improving the quality of arterial spin labeling (ASL) images.

Methods

Different averaging strategies, including windowed and interleaved averaging methods, and different levels of averaging before and after convolutional neural network–based and transformer-based denoising were studied. The experiments were performed on 152 single-delay ASL scans from 152 subjects, including pulsed and pseudo-continuous ASL acquisitions. Four-fold cross-validation was implemented in all experiments. The effect of including calibration scans (M0) was studied and compared across images of different levels of signal-to-noise ratio (SNR). The generalizability of DL denoising was examined in experiments using low-SNR ground truth in training. The results were assessed using image-quality metrics including structural similarity, peak SNR, and normalized mean absolute error.

Results

Including M0 was almost always beneficial, with a dependence on the SNR of the input ASL images. Windowed averaging outperformed interleaved averaging, supporting the practice of reducing scan time. Averaging of ASL images before DL denoising was more advantageous than averaging after. Matching the SNR levels of the images in training and inferencing was important for optimal performance. These findings were consistent across convolutional neural network–based and transformer-based models. The generalizability of DL-based denoising was confirmed, and its capability to reduce artifacts was observed.

Conclusion

This study supports the use of DL-based denoising in improving the image quality of ASL and reducing scan time and provides insights to help optimize DL-denoising pipelines.

Abstract Image

基于深度学习的动脉自旋标记去噪优化:平均和训练策略的影响。
目的:需要系统研究基于深度学习(deep learning, DL)去噪中的平均及其他相关训练策略的效果,以优化这类处理管道,提高动脉自旋标记(arterial spin labeling, ASL)图像的质量。方法:研究了不同的平均策略,包括加窗和交错平均方法,以及基于卷积神经网络和基于变压器去噪前后的不同平均水平。实验对152名受试者进行了152次单延迟ASL扫描,包括脉冲和伪连续ASL获取。所有实验均采用四重交叉验证。在不同信噪比(SNR)水平的图像中,研究并比较了包含校准扫描(M0)的影响。在低信噪比的训练中,通过实验检验了深度去噪的泛化性。使用图像质量指标评估结果,包括结构相似性、峰值信噪比和归一化平均绝对误差。结果:包括M0几乎总是有益的,依赖于输入ASL图像的信噪比。窗口平均优于交错平均,支持减少扫描时间的做法。DL去噪前对ASL图像进行平均比去噪后进行平均更有利。在训练和推理中匹配图像的信噪比水平对于优化性能非常重要。这些发现在基于卷积神经网络和基于变压器的模型中是一致的。验证了基于dl的去噪方法的通用性,并观察了其去除伪影的能力。结论:本研究支持基于dl去噪技术在改善ASL图像质量和缩短扫描时间方面的应用,并为优化dl去噪管道提供了有益的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
6.70
自引率
24.20%
发文量
376
审稿时长
2-4 weeks
期刊介绍: Magnetic Resonance in Medicine (Magn Reson Med) is an international journal devoted to the publication of original investigations concerned with all aspects of the development and use of nuclear magnetic resonance and electron paramagnetic resonance techniques for medical applications. Reports of original investigations in the areas of mathematics, computing, engineering, physics, biophysics, chemistry, biochemistry, and physiology directly relevant to magnetic resonance will be accepted, as well as methodology-oriented clinical studies.
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