{"title":"Optimization of deep learning–based denoising for arterial spin labeling: Effects of averaging and training strategies","authors":"Jia Guo, Arun Sharma, Greg Zaharchuk, Hossein Rahimzadeh, Naveed Ilyas","doi":"10.1002/mrm.70013","DOIUrl":null,"url":null,"abstract":"<div>\n \n \n <section>\n \n <h3> Purpose</h3>\n \n <p>Systematic study of the effects of averaging and other relevant training strategies in deep learning (DL)–based denoising is required to optimize such processing pipelines for improving the quality of arterial spin labeling (ASL) images.</p>\n </section>\n \n <section>\n \n <h3> Methods</h3>\n \n <p>Different averaging strategies, including windowed and interleaved averaging methods, and different levels of averaging before and after convolutional neural network–based and transformer-based denoising were studied. The experiments were performed on 152 single-delay ASL scans from 152 subjects, including pulsed and pseudo-continuous ASL acquisitions. Four-fold cross-validation was implemented in all experiments. The effect of including calibration scans (M<sub>0</sub>) was studied and compared across images of different levels of signal-to-noise ratio (SNR). The generalizability of DL denoising was examined in experiments using low-SNR ground truth in training. The results were assessed using image-quality metrics including structural similarity, peak SNR, and normalized mean absolute error.</p>\n </section>\n \n <section>\n \n <h3> Results</h3>\n \n <p>Including M<sub>0</sub> was almost always beneficial, with a dependence on the SNR of the input ASL images. Windowed averaging outperformed interleaved averaging, supporting the practice of reducing scan time. Averaging of ASL images before DL denoising was more advantageous than averaging after. Matching the SNR levels of the images in training and inferencing was important for optimal performance. These findings were consistent across convolutional neural network–based and transformer-based models. The generalizability of DL-based denoising was confirmed, and its capability to reduce artifacts was observed.</p>\n </section>\n \n <section>\n \n <h3> Conclusion</h3>\n \n <p>This study supports the use of DL-based denoising in improving the image quality of ASL and reducing scan time and provides insights to help optimize DL-denoising pipelines.</p>\n </section>\n </div>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":"94 6","pages":"2715-2731"},"PeriodicalIF":3.0000,"publicationDate":"2025-08-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/mrm.70013","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Magnetic Resonance in Medicine","FirstCategoryId":"3","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/mrm.70013","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING","Score":null,"Total":0}
引用次数: 0
Abstract
Purpose
Systematic study of the effects of averaging and other relevant training strategies in deep learning (DL)–based denoising is required to optimize such processing pipelines for improving the quality of arterial spin labeling (ASL) images.
Methods
Different averaging strategies, including windowed and interleaved averaging methods, and different levels of averaging before and after convolutional neural network–based and transformer-based denoising were studied. The experiments were performed on 152 single-delay ASL scans from 152 subjects, including pulsed and pseudo-continuous ASL acquisitions. Four-fold cross-validation was implemented in all experiments. The effect of including calibration scans (M0) was studied and compared across images of different levels of signal-to-noise ratio (SNR). The generalizability of DL denoising was examined in experiments using low-SNR ground truth in training. The results were assessed using image-quality metrics including structural similarity, peak SNR, and normalized mean absolute error.
Results
Including M0 was almost always beneficial, with a dependence on the SNR of the input ASL images. Windowed averaging outperformed interleaved averaging, supporting the practice of reducing scan time. Averaging of ASL images before DL denoising was more advantageous than averaging after. Matching the SNR levels of the images in training and inferencing was important for optimal performance. These findings were consistent across convolutional neural network–based and transformer-based models. The generalizability of DL-based denoising was confirmed, and its capability to reduce artifacts was observed.
Conclusion
This study supports the use of DL-based denoising in improving the image quality of ASL and reducing scan time and provides insights to help optimize DL-denoising pipelines.
期刊介绍:
Magnetic Resonance in Medicine (Magn Reson Med) is an international journal devoted to the publication of original investigations concerned with all aspects of the development and use of nuclear magnetic resonance and electron paramagnetic resonance techniques for medical applications. Reports of original investigations in the areas of mathematics, computing, engineering, physics, biophysics, chemistry, biochemistry, and physiology directly relevant to magnetic resonance will be accepted, as well as methodology-oriented clinical studies.