Complete Mitochondrial Genome of Tropilaelaps mercedesae (Acari: Laelapidae): Genomic Comparison and Phylogenetic Inference in the Dermanyssoidea Superfamily

IF 1.6 4区 农林科学 Q3 ENTOMOLOGY
Min Woo Park, Jee-Young Pyo, Seung Hyun Lee, Jeong Sun Park, Iksoo Kim
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Abstract

The complete mitochondrial genome (mitogenome) of Tropilaelaps mercedesae (Acari: Laelapidae), which is a serious ectoparasite of several honeybee species, was sequenced and characterized for its genomic features. The results were then compared with those of other available Dermanyssoidea members and used to reconstruct phylogenetic relationships within Dermanyssoidea. Moreover, the current T. mercedesae mitogenome from South Korea was compared with publicly available data from China to determine suitable genes for a subsequent population-level study. Peculiarly, the 15,119-bp long T. mercedesae mitogenome has an 899-bp-long control region containing four copies of a repeat unit that are interrupted by non-repeat sequences. Additionally, T. mercedesae has a new gene arrangement among the Dermanyssoidea species, revealing eight translocated genes, one inverted tRNA block, and one inverted and translocated tRNA. Phylogenetic analyses, which included all available public data, clearly indicated non-monophyletic Laelapidae to which the current T. mercedesae is included. Comparison of two geographic samples of T. mercedesae evidenced several protein-coding genes, including nad5 and cytB (the two most variable), which had higher variability than that of cox1, thus suggesting the potential usefulness of these gene sequences for population genetic studies. Current T. mercedesae mitogenome sequences could provide baseline information for subsequent population-level studies and phylogenetic inferences at diverse taxonomic levels within Dermanyssoidea.

柔毛螨科线粒体全基因组(蜱螨亚纲:柔毛螨科):基因组比较及系统发育推断
对几种蜜蜂严重的外寄生虫Tropilaelaps mercedesae (Acari: Laelapidae)的线粒体全基因组(mitogenome)进行了测序和鉴定。然后将结果与其他可用的Dermanyssoidea成员的结果进行比较,并用于重建Dermanyssoidea内部的系统发育关系。此外,将目前来自韩国的T. mercedesae有丝分裂基因组与来自中国的公开数据进行比较,以确定适合随后种群水平研究的基因。特别的是,长15,119 bp的T. mercedesae有丝分裂基因组有一个899 bp长的控制区,其中包含一个重复单元的四个拷贝,该重复单元被非重复序列中断。此外,T. mercedesae在Dermanyssoidea物种中有一个新的基因排列,揭示了8个易位基因,1个倒置tRNA块,1个倒置易位tRNA。系统发育分析,包括所有可用的公开数据,清楚地表明非单系的Laelapidae,包括目前的T. mercedesae。通过对两个地理样本的比较,证实了包括nad5和cytB(两个最易变的基因)在内的几个蛋白质编码基因比cox1具有更高的可变性,从而表明这些基因序列在群体遗传研究中的潜在用途。目前的梅塞蝇有丝分裂基因组序列可以为后续的种群水平研究和在不同分类水平上的系统发育推断提供基线信息。
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来源期刊
CiteScore
2.50
自引率
7.70%
发文量
64
期刊介绍: Entomological Research is the successor of the Korean Journal of Entomology. Published by the Entomological Society of Korea (ESK) since 1970, it is the official English language journal of ESK, and publishes original research articles dealing with any aspect of entomology. Papers in any of the following fields will be considered: -systematics- ecology- physiology- biochemistry- pest control- embryology- genetics- cell and molecular biology- medical entomology- apiculture and sericulture. The Journal publishes research papers and invited reviews.
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