{"title":"A Wasserstein Space Based Framework for Processing Fiber Orientation Geometry in Diffusion MRI.","authors":"Xinyu Nie,Yonggang Shi","doi":"10.1109/tmi.2025.3595367","DOIUrl":null,"url":null,"abstract":"The fiber orientation distribution (FOD) function is an advanced model for high angular resolution diffusion MRI, capable of representing complex crossing or fanning fiber geometries. However, the intricate mathematical structures of FOD functions pose significant challenges for data processing and analysis. Current frameworks often fail to consider fiber bundle rotation information among FOD peaks, leading to improper data processing, such as inaccurate FOD interpolation and, consequently, anatomically incorrect fiber tracking. This paper presents a novel Wasserstein space based framework for processing and analyzing FOD functions that systematically considers fiber-bundle-specific geometry. Our approach begins with a spherical deconvolution method to accurately detect and decompose FOD functions into single-peak lobes. These single-peak lobes are then embedded into the Wasserstein space, where a new metric for FOD functions is defined, capable of handling rotations among peak lobes. We introduce a geometry-aware clustering method to regroup the single-peak lobes for further bundle-specific FOD processing. The proposed framework is applied to the essential task of FOD interpolation, computed as the Barycenter of the new metric, with a fast approximation method for efficient computation. Experiments conducted on synthetic data, as well as datasets from the Human Connectome Project (HCP) and the Alzheimer's Disease Neuroimaging Initiative (ADNI), demonstrate that our framework effectively handles complex fiber geometries, provides anatomically meaningful FOD interpolations, and significantly enhances the performance of FOD-based tractography.","PeriodicalId":13418,"journal":{"name":"IEEE Transactions on Medical Imaging","volume":"154 1","pages":""},"PeriodicalIF":9.8000,"publicationDate":"2025-08-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE Transactions on Medical Imaging","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1109/tmi.2025.3595367","RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
引用次数: 0
Abstract
The fiber orientation distribution (FOD) function is an advanced model for high angular resolution diffusion MRI, capable of representing complex crossing or fanning fiber geometries. However, the intricate mathematical structures of FOD functions pose significant challenges for data processing and analysis. Current frameworks often fail to consider fiber bundle rotation information among FOD peaks, leading to improper data processing, such as inaccurate FOD interpolation and, consequently, anatomically incorrect fiber tracking. This paper presents a novel Wasserstein space based framework for processing and analyzing FOD functions that systematically considers fiber-bundle-specific geometry. Our approach begins with a spherical deconvolution method to accurately detect and decompose FOD functions into single-peak lobes. These single-peak lobes are then embedded into the Wasserstein space, where a new metric for FOD functions is defined, capable of handling rotations among peak lobes. We introduce a geometry-aware clustering method to regroup the single-peak lobes for further bundle-specific FOD processing. The proposed framework is applied to the essential task of FOD interpolation, computed as the Barycenter of the new metric, with a fast approximation method for efficient computation. Experiments conducted on synthetic data, as well as datasets from the Human Connectome Project (HCP) and the Alzheimer's Disease Neuroimaging Initiative (ADNI), demonstrate that our framework effectively handles complex fiber geometries, provides anatomically meaningful FOD interpolations, and significantly enhances the performance of FOD-based tractography.
期刊介绍:
The IEEE Transactions on Medical Imaging (T-MI) is a journal that welcomes the submission of manuscripts focusing on various aspects of medical imaging. The journal encourages the exploration of body structure, morphology, and function through different imaging techniques, including ultrasound, X-rays, magnetic resonance, radionuclides, microwaves, and optical methods. It also promotes contributions related to cell and molecular imaging, as well as all forms of microscopy.
T-MI publishes original research papers that cover a wide range of topics, including but not limited to novel acquisition techniques, medical image processing and analysis, visualization and performance, pattern recognition, machine learning, and other related methods. The journal particularly encourages highly technical studies that offer new perspectives. By emphasizing the unification of medicine, biology, and imaging, T-MI seeks to bridge the gap between instrumentation, hardware, software, mathematics, physics, biology, and medicine by introducing new analysis methods.
While the journal welcomes strong application papers that describe novel methods, it directs papers that focus solely on important applications using medically adopted or well-established methods without significant innovation in methodology to other journals. T-MI is indexed in Pubmed® and Medline®, which are products of the United States National Library of Medicine.