{"title":"Accurate dynamical simulation of continuous precession electron diffraction tomography","authors":"Zeyue Zhang, Xiaoyu Liu, Yihan Shen, Junliang Sun","doi":"10.1107/S1600576725005333","DOIUrl":null,"url":null,"abstract":"<p>Continuous precession rotation electron diffraction (cPEDT) is a novel method combining continuous goniometer rotation and precession of the incident beam to enhance three-dimensional electron diffraction (3D ED) data completeness and collection efficiency. However, cPEDT remains computationally prohibitive for dynamical refinement due to its intrinsic reciprocal-space oversampling. Herein, we present a MATLAB-based framework implementing golden-ratio shift orientation sampling, achieving convergence within 512 Bloch wave calculations per frame, which is a tenfold reduction compared with conventional protocols. Systematic benchmarking across different 3D ED methods reveals cPEDT's superior robustness with respect to crystal misorientations and self-consistency for intensity integration for kinematical treatment. This article also validates the thickness-inversion theorem, enabling enantiomorph assignment through thickness reversal (<i>t</i> → −<i>t</i>), and the impact of unobserved high-resolution reflections is evaluated to be negligible. Verified by eight representative structures, this work establishes cPEDT's robustness and potential feasibility for dynamical refinement applications.</p>","PeriodicalId":48737,"journal":{"name":"Journal of Applied Crystallography","volume":"58 4","pages":"1234-1248"},"PeriodicalIF":2.8000,"publicationDate":"2025-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Applied Crystallography","FirstCategoryId":"88","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1107/S1600576725005333","RegionNum":3,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
Continuous precession rotation electron diffraction (cPEDT) is a novel method combining continuous goniometer rotation and precession of the incident beam to enhance three-dimensional electron diffraction (3D ED) data completeness and collection efficiency. However, cPEDT remains computationally prohibitive for dynamical refinement due to its intrinsic reciprocal-space oversampling. Herein, we present a MATLAB-based framework implementing golden-ratio shift orientation sampling, achieving convergence within 512 Bloch wave calculations per frame, which is a tenfold reduction compared with conventional protocols. Systematic benchmarking across different 3D ED methods reveals cPEDT's superior robustness with respect to crystal misorientations and self-consistency for intensity integration for kinematical treatment. This article also validates the thickness-inversion theorem, enabling enantiomorph assignment through thickness reversal (t → −t), and the impact of unobserved high-resolution reflections is evaluated to be negligible. Verified by eight representative structures, this work establishes cPEDT's robustness and potential feasibility for dynamical refinement applications.
期刊介绍:
Many research topics in condensed matter research, materials science and the life sciences make use of crystallographic methods to study crystalline and non-crystalline matter with neutrons, X-rays and electrons. Articles published in the Journal of Applied Crystallography focus on these methods and their use in identifying structural and diffusion-controlled phase transformations, structure-property relationships, structural changes of defects, interfaces and surfaces, etc. Developments of instrumentation and crystallographic apparatus, theory and interpretation, numerical analysis and other related subjects are also covered. The journal is the primary place where crystallographic computer program information is published.