A taxogenomic view of the genus Torulaspora: an expansion from ten to twenty-two species.

IF 7.3 1区 生物学 Q1 MYCOLOGY
Persoonia Pub Date : 2025-06-01 Epub Date: 2025-05-23 DOI:10.3114/persoonia.2025.54.08
M R Silva, F Paraíso, J Al-Oboudi, M Abegg, A Aires, K O Barros, P H Brito, M Jarzyna, K Sylvester, Q K Langdon, D A Opulente, F Carriconde, J W Fell, T A Hofmann, M-A Lachance, J-L Legras, D Libkind, A Pontes, P Gonçalves, C A Rosa, M Groenewald, C T Hittinger, J P Sampaio
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引用次数: 0

Abstract

The yeast genus Torulaspora (subphylum Saccharomycotina, family Saccharomycetaceae) is mostly known from its type species, T. delbrueckii, a frequent colonizer of wine and sourdough bread fermentations. The genus currently contains 10 species that are typically found in various natural terrestrial environments in temperate and tropical climates. Here we employ taxogenomic analyses to investigate a large collection of Torulaspora strains obtained in multiple surveys we carried out in Asia, Australasia, North America, South America, and Europe, and to which we added several strains maintained in culture collections. Our analyses detected twelve novel species that are formally described here, thereby more than doubling the species diversity of Torulaspora. We also sketch a genotype-phenotype map for the genus and show how the complex relationship between key genes and the physiological traits they control both between and within species. This remarkable increase in the number of species in the genus Torulaspora highlights how limited the current inventory of fungal taxa is. It also shows how integrated taxogenomic approaches can foster the assessment of species circumscriptions in fungi. Citation: Silva MR, Paraíso F, Al-Oboudi J, Abegg M, Aires A, Barros KO, Brito PH, Jarzyna M, Sylvester K, Langdon QK, Opulente DA, Carriconde F, Fell JW, Hofmann TA, Lachance M-A, Legras J-L, Libkind D, Pontes A, Gonçalves P, Rosa CA, Groenewald M, Hittinger CT, Sampaio JP (2025). A taxogenomic view of the genus Torulaspora: an expansion from ten to twenty-two species. Persoonia 54: 265-283. doi: 10.3114/persoonia.2025.54.08.

Abstract Image

Abstract Image

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虎蛛属的分类基因组学观点:从10种扩展到22种。
Torulaspora酵母属(Saccharomycotina亚门,saccharomycaceae科)主要以其模式种T. delbrueckii而为人所知,T. delbrueckii是葡萄酒和酵母面包发酵的常客。该属目前包含10种,通常在温带和热带气候的各种自然陆生环境中发现。在这里,我们采用分类基因组学分析来调查我们在亚洲、澳大拉西亚、北美、南美和欧洲进行的多次调查中获得的大量Torulaspora菌株,并在培养收藏中添加了一些菌株。我们的分析发现了这里正式描述的12个新物种,从而使Torulaspora的物种多样性增加了一倍以上。我们还绘制了该属的基因型-表型图谱,并展示了关键基因与它们在物种之间和物种内控制的生理性状之间的复杂关系。Torulaspora属物种数量的显著增加突出了真菌分类群目前的库存是多么有限。它还显示了整合的分类基因组方法如何促进真菌物种界限的评估。引用本文:Silva MR, Paraíso F, Al-Oboudi J, Abegg M, Aires A, Barros KO, Brito PH, Jarzyna M, Sylvester K, Langdon QK, Opulente DA, Carriconde F, Fell JW, Hofmann TA, Lachance M-A, Legras J- l, Libkind D, Pontes A, gonalves P, Rosa CA, Groenewald M, Hittinger CT, Sampaio JP(2025)。虎蛛属的分类基因组学观点:从10种扩展到22种。《人》54:265-283。doi: 10.3114 / persoonia.2025.54.08。
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来源期刊
Persoonia
Persoonia MYCOLOGY-
CiteScore
17.70
自引率
5.50%
发文量
10
审稿时长
3 months
期刊介绍: Persoonia aspires to publish papers focusing on the molecular systematics and evolution of fungi. Additionally, it seeks to advance fungal taxonomy by employing a polythetic approach to elucidate the genuine phylogeny and relationships within the kingdom Fungi. The journal is dedicated to disseminating high-quality papers that unravel both known and novel fungal taxa at the DNA level. Moreover, it endeavors to provide fresh insights into evolutionary processes and relationships. The scope of papers considered encompasses research articles, along with topical and book reviews.
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