High-resolution phenomics dataset collected on a field-grown, EMS-mutagenized sorghum population evaluated in hot, arid conditions.

IF 1.7 Q2 MULTIDISCIPLINARY SCIENCES
Jeffrey Demieville, Brian Dilkes, Andrea L Eveland, Duke Pauli
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引用次数: 0

Abstract

Objectives: The University of Arizona Field Scanner (FS) is capable of generating massive amounts of data from a variety of instruments at high spatial and temporal resolution. The accompanying field infrastructure beneath the system offers capacity for controlled irrigation regimes in a hot, arid environment. Approximately 194 terabytes of raw and processed phenotypic image data were generated over two growing seasons (2020 and 2022) on a population of 434 sequence-indexed, EMS-mutagenized sorghum lines in the genetic background BTx623; the population was grown under well-watered and water-limited conditions. Collectively, these data enable links between genotype and dynamic, drought-responsive phenotypes, which can accelerate crop improvement efforts. However, analysis of these data can be challenging for researchers without background knowledge of the system and preliminary processing.

Data description: This dataset contains formatted tabular data generated from sensing system outputs suitable for a wide range of end-users and includes plant-level bounding areas, temperatures, and point cloud characteristics, as well as plot-level photosynthetic parameters and accompanying weather data. The dataset includes approximately 422 megabytes of tabular data totaling 1,903,412 unique unfiltered rows of FS data, 526,917 cleaned rows of FS data, and 285 rows of weather data from the two field seasons.

高分辨率表型组学数据收集了田间种植的ems诱变高粱群体,在炎热干旱条件下进行了评估。
目标:亚利桑那大学现场扫描仪(FS)能够以高空间和时间分辨率从各种仪器生成大量数据。该系统下配套的田间基础设施提供了在炎热干旱环境下进行控制灌溉的能力。在遗传背景为BTx623的434个序列索引的ems诱变高粱品系的两个生长季节(2020年和2022年)中产生了大约194 tb的原始和处理过的表型图像数据;人口是在水充足和水有限的条件下生长的。总的来说,这些数据使基因型与动态干旱响应表型之间建立了联系,从而可以加快作物改良工作。然而,对于没有系统背景知识和初步处理的研究人员来说,分析这些数据可能具有挑战性。数据描述:该数据集包含由传感系统输出生成的格式化表格数据,适用于广泛的最终用户,包括植物级边界区域、温度和点云特征,以及地块级光合参数和随附的天气数据。该数据集包括大约422兆字节的表格数据,共计1,903,412行唯一的未过滤的FS数据,526,917行已清理的FS数据,以及285行来自两个野外季节的天气数据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
BMC Research Notes
BMC Research Notes Biochemistry, Genetics and Molecular Biology-Biochemistry, Genetics and Molecular Biology (all)
CiteScore
3.60
自引率
0.00%
发文量
363
审稿时长
15 weeks
期刊介绍: BMC Research Notes publishes scientifically valid research outputs that cannot be considered as full research or methodology articles. We support the research community across all scientific and clinical disciplines by providing an open access forum for sharing data and useful information; this includes, but is not limited to, updates to previous work, additions to established methods, short publications, null results, research proposals and data management plans.
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