Prognostic and immunological significance of CD82 in cancers with focus on hepatocellular carcinoma: A bioinformatics approach.

IF 1.4 4区 医学 Q2 MEDICINE, GENERAL & INTERNAL
Sikandar Ali, Shiyu Liu, Jiali Chen, Jawad Ullah, Guoyu Mou, Xiaohua Huang
{"title":"Prognostic and immunological significance of CD82 in cancers with focus on hepatocellular carcinoma: A bioinformatics approach.","authors":"Sikandar Ali, Shiyu Liu, Jiali Chen, Jawad Ullah, Guoyu Mou, Xiaohua Huang","doi":"10.1097/MD.0000000000043396","DOIUrl":null,"url":null,"abstract":"<p><p>Despite significant successes, immunotherapy continues to face numerous challenges in practical applications. CD82 plays an important role in the tumor microenvironment (TME) across various cancers. However, the prognostic value of CD82 in immunotherapy and its role in the immune response remain unclear. The expression levels of CD82 in healthy human tissues were assessed using the human protein atlas (HPA) database tool. The association among CD82 expression levels, copy number variations (CNV), and methylation was explored using the gene set cancer analysis (GSCA) database. Timer tumor immune estimation resource (TIMER) database is used for immune checkpoint and immune infiltration. The LinkedOmincs database is used for enrichment analysis. The statistical inquiry was performed through the R program (version 4.4.1). The result has shown that CD82 mRNA levels were significantly downregulated in most tumor types. Abnormal CD82 mRNA expression was associated with CNV and methylation changes in tumor tissues. Furthermore, several immune checkpoint genes related to CD82 influenced prognosis and were linked to increased immune cell infiltration across various cancer forms, including liver hepatocellular carcinoma (LIHC). The prognosis of the patients under multiple cancer forms, particularly LIHC, was remarkably influenced by CD82, which plays a vital role in modulating immune infiltration. CD82 has the potential to serve as both a prognostic indicator and an immunological biomarker in human cancer. CD82 expression is frequently downregulated across various cancer associated with poor prognosis, influenced by CNV and DNA methylation alterations. Its abnormal expression correlates with changes in immune checkpoint gene activity and enhanced immune cell infiltration, notably in liver. These associations suggest that CD82 plays a significant role in shaping the tumor immune microenvironment and affects patient prognosis. Consequently, CD82 holds promise as both a prognostic biomarker and an immunomodulatory target in cancer immunotherapy.</p>","PeriodicalId":18549,"journal":{"name":"Medicine","volume":"104 30","pages":"e43396"},"PeriodicalIF":1.4000,"publicationDate":"2025-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12303455/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Medicine","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1097/MD.0000000000043396","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MEDICINE, GENERAL & INTERNAL","Score":null,"Total":0}
引用次数: 0

Abstract

Despite significant successes, immunotherapy continues to face numerous challenges in practical applications. CD82 plays an important role in the tumor microenvironment (TME) across various cancers. However, the prognostic value of CD82 in immunotherapy and its role in the immune response remain unclear. The expression levels of CD82 in healthy human tissues were assessed using the human protein atlas (HPA) database tool. The association among CD82 expression levels, copy number variations (CNV), and methylation was explored using the gene set cancer analysis (GSCA) database. Timer tumor immune estimation resource (TIMER) database is used for immune checkpoint and immune infiltration. The LinkedOmincs database is used for enrichment analysis. The statistical inquiry was performed through the R program (version 4.4.1). The result has shown that CD82 mRNA levels were significantly downregulated in most tumor types. Abnormal CD82 mRNA expression was associated with CNV and methylation changes in tumor tissues. Furthermore, several immune checkpoint genes related to CD82 influenced prognosis and were linked to increased immune cell infiltration across various cancer forms, including liver hepatocellular carcinoma (LIHC). The prognosis of the patients under multiple cancer forms, particularly LIHC, was remarkably influenced by CD82, which plays a vital role in modulating immune infiltration. CD82 has the potential to serve as both a prognostic indicator and an immunological biomarker in human cancer. CD82 expression is frequently downregulated across various cancer associated with poor prognosis, influenced by CNV and DNA methylation alterations. Its abnormal expression correlates with changes in immune checkpoint gene activity and enhanced immune cell infiltration, notably in liver. These associations suggest that CD82 plays a significant role in shaping the tumor immune microenvironment and affects patient prognosis. Consequently, CD82 holds promise as both a prognostic biomarker and an immunomodulatory target in cancer immunotherapy.

CD82在肝癌中的预后和免疫学意义:生物信息学方法。
尽管取得了巨大的成功,但免疫疗法在实际应用中仍然面临着许多挑战。CD82在各种癌症的肿瘤微环境(TME)中起着重要作用。然而,CD82在免疫治疗中的预后价值及其在免疫应答中的作用尚不清楚。利用人类蛋白图谱(human protein atlas, HPA)数据库工具评估健康人体组织中CD82的表达水平。使用基因集癌症分析(GSCA)数据库探索CD82表达水平、拷贝数变异(CNV)和甲基化之间的关系。定时器肿瘤免疫估计资源(Timer)数据库用于免疫检查点和免疫浸润。linkedomins数据库用于富集分析。统计查询通过R程序(版本4.4.1)执行。结果显示CD82 mRNA水平在大多数肿瘤类型中显著下调。CD82 mRNA表达异常与肿瘤组织中CNV和甲基化变化相关。此外,与CD82相关的几个免疫检查点基因影响预后,并与包括肝癌(LIHC)在内的各种癌症形式的免疫细胞浸润增加有关。CD82在调节免疫浸润中起着至关重要的作用,对多种癌症形式,特别是LIHC患者的预后有显著影响。CD82有潜力作为人类癌症的预后指标和免疫生物标志物。CD82表达在各种与预后不良相关的癌症中经常下调,受CNV和DNA甲基化改变的影响。其异常表达与免疫检查点基因活性的改变和免疫细胞浸润增强有关,尤其是在肝脏。这些关联表明CD82在形成肿瘤免疫微环境和影响患者预后方面起着重要作用。因此,CD82有望成为癌症免疫治疗中的预后生物标志物和免疫调节靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Medicine
Medicine 医学-医学:内科
CiteScore
2.80
自引率
0.00%
发文量
4342
审稿时长
>12 weeks
期刊介绍: Medicine is now a fully open access journal, providing authors with a distinctive new service offering continuous publication of original research across a broad spectrum of medical scientific disciplines and sub-specialties. As an open access title, Medicine will continue to provide authors with an established, trusted platform for the publication of their work. To ensure the ongoing quality of Medicine’s content, the peer-review process will only accept content that is scientifically, technically and ethically sound, and in compliance with standard reporting guidelines.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信