Museomics and Salvaged Feathers Piece Together the Evolutionary History and Conservation Genomics of the Elusive, Critically Endangered Night Parrot (Pezoporus occidentalis).

IF 3.9 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Heng Lin Yeap, Gunjan Pandey, Jeremy J Austin, John G Oakeshott, Christopher M Hardy, Stephen A Murphy, Nicholas P Leseberg, Allan H Burbidge, Kenny J Travouillon, Leo Joseph, Anna M Kearns
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引用次数: 0

Abstract

The Night Parrot is a critically endangered nocturnal bird of Australia's arid zone. The species was "lost" for most of the 20th century until its rediscovery in 1990. Extant populations are now known in eastern and western Australia, but the species has been extirpated from much of its historical range. Here we estimate critically needed Essential Biodiversity Variables (EBVs) for the Night Parrot from historical and opportunistically collected contemporary samples. We find little population structure across the species' range and evidence of recent connectivity between extant populations ~2000 km apart. Most eastern individuals show significant kinship with one another, as did two from an extinct population in southern Australia. Heterozygosity is similarly low in all extant populations but ten-fold lower in the extinct population sampled. Coalescent modelling of effective population size (Ne) suggests that Night Parrot numbers were reasonably high until around 90 years ago when Ne crashed from ~10,000 to ~100. Current Ne is now at its lowest in the past several million years. Our findings will help guide the ongoing management of one of Australia's most threatened birds.

博物馆组学和打捞的羽毛拼凑了难以捉摸的、极度濒危的夜鹦鹉(Pezoporus occidentalis)的进化历史和保护基因组学。
夜鹦鹉是澳大利亚干旱地区一种极度濒危的夜行鸟类。这个物种在20世纪的大部分时间里都“消失”了,直到1990年才被重新发现。现在在澳大利亚东部和西部已知现存的种群,但该物种已经从其历史范围的大部分地区灭绝。在这里,我们从历史和机会主义收集的当代样本中估计了夜鹦鹉迫切需要的基本生物多样性变量(ebv)。我们发现整个物种范围内的种群结构很少,现存种群之间相隔约2000公里的证据表明最近有连通性。大多数东部个体彼此之间表现出明显的亲缘关系,就像澳大利亚南部一个灭绝种群中的两个个体一样。杂合性在所有现存种群中同样低,但在已灭绝种群中低10倍。有效种群规模(Ne)的Coalescent模型表明,在大约90年前,夜鹦鹉的数量一直相当高,当时Ne从约10,000下降到约100。现在的北半球正处于过去几百万年来的最低点。我们的发现将有助于指导澳大利亚最受威胁的鸟类之一的持续管理。
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来源期刊
Molecular Ecology
Molecular Ecology 生物-进化生物学
CiteScore
8.40
自引率
10.20%
发文量
472
审稿时长
1 months
期刊介绍: Molecular Ecology publishes papers that utilize molecular genetic techniques to address consequential questions in ecology, evolution, behaviour and conservation. Studies may employ neutral markers for inference about ecological and evolutionary processes or examine ecologically important genes and their products directly. We discourage papers that are primarily descriptive and are relevant only to the taxon being studied. Papers reporting on molecular marker development, molecular diagnostics, barcoding, or DNA taxonomy, or technical methods should be re-directed to our sister journal, Molecular Ecology Resources. Likewise, papers with a strongly applied focus should be submitted to Evolutionary Applications. Research areas of interest to Molecular Ecology include: * population structure and phylogeography * reproductive strategies * relatedness and kin selection * sex allocation * population genetic theory * analytical methods development * conservation genetics * speciation genetics * microbial biodiversity * evolutionary dynamics of QTLs * ecological interactions * molecular adaptation and environmental genomics * impact of genetically modified organisms
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