Mengting Gao , Zhaoqi Yan , Zexin Liu , Yunxia Jiang , Tengteng Liu , Xingjun Miao , Meixue Dai , Tanay Bose , Runlei Chang
{"title":"A novel Arthrobotrys species: Taxonomic characterization, nematicidal activity, and multi-omics insights into nematode predation","authors":"Mengting Gao , Zhaoqi Yan , Zexin Liu , Yunxia Jiang , Tengteng Liu , Xingjun Miao , Meixue Dai , Tanay Bose , Runlei Chang","doi":"10.1016/j.biocontrol.2025.105853","DOIUrl":null,"url":null,"abstract":"<div><div><em>Bursaphelenchus xylophilus</em>, the pinewood nematode (PWN), is a devastating invasive pest responsible for widespread mortality in global conifer forests. During a survey of bark beetle-associated fungi, a nematode-trapping fungus was isolated from an empty beetle gallery in <em>Pinus thunbergii</em>. ITS sequence analysis suggested it represented a novel species. This study aimed to characterize the fungus taxonomically and evaluate its biocontrol potential against PWN. Multi-locus phylogenetic analyses (ITS, TEF1-α, RPB2) confirmed the isolate as a new species, <em>Arthrobotrys byssisimilis</em> sp. nov. Morphological examination revealed adhesive trapping networks and distinctive ellipsoidal conidia. Enzymatic assays demonstrated chitinase and protease activity, with optimal conditions defined for pH and temperature. Culture filtrates, protein extracts, and secondary metabolites showed rapid, dose-dependent nematicidal effects, achieving 100 % PWN mortality within 10–30 min. The fungus exhibited strong tolerance to pine-derived volatiles (α-pinene, β-pinene, turpentine, and ethanol), indicating high adaptability to the host environment. Whole-genome sequencing revealed a 36.97 Mb genome with 8,354 predicted genes, including 104 proteases, 8 chitinases, and diverse secondary metabolite biosynthesis clusters. Transcriptomic profiling after nematode exposure identified 638 differentially expressed genes, including virulence-related enzymes (proteases, CAZymes), cytochrome P450s, and PHI factors, with evidence of stage-specific regulation. <em>Arthrobotrys byssisimilis</em> is the first <em>Arthrobotrys</em> species reported from a bark beetle gallery, expanding the ecological scope of the genus. The integrated in vitro nematicidal activity, physiological adaptability, and multi-omics data suggest <em>A. byssisimilis</em> warrants further evaluation as a potential biocontrol agent against PWN, while its unique genomic features provide new molecular targets for investigating fungal-nematode interactions.</div></div>","PeriodicalId":8880,"journal":{"name":"Biological Control","volume":"208 ","pages":"Article 105853"},"PeriodicalIF":3.7000,"publicationDate":"2025-07-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biological Control","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S104996442500163X","RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Bursaphelenchus xylophilus, the pinewood nematode (PWN), is a devastating invasive pest responsible for widespread mortality in global conifer forests. During a survey of bark beetle-associated fungi, a nematode-trapping fungus was isolated from an empty beetle gallery in Pinus thunbergii. ITS sequence analysis suggested it represented a novel species. This study aimed to characterize the fungus taxonomically and evaluate its biocontrol potential against PWN. Multi-locus phylogenetic analyses (ITS, TEF1-α, RPB2) confirmed the isolate as a new species, Arthrobotrys byssisimilis sp. nov. Morphological examination revealed adhesive trapping networks and distinctive ellipsoidal conidia. Enzymatic assays demonstrated chitinase and protease activity, with optimal conditions defined for pH and temperature. Culture filtrates, protein extracts, and secondary metabolites showed rapid, dose-dependent nematicidal effects, achieving 100 % PWN mortality within 10–30 min. The fungus exhibited strong tolerance to pine-derived volatiles (α-pinene, β-pinene, turpentine, and ethanol), indicating high adaptability to the host environment. Whole-genome sequencing revealed a 36.97 Mb genome with 8,354 predicted genes, including 104 proteases, 8 chitinases, and diverse secondary metabolite biosynthesis clusters. Transcriptomic profiling after nematode exposure identified 638 differentially expressed genes, including virulence-related enzymes (proteases, CAZymes), cytochrome P450s, and PHI factors, with evidence of stage-specific regulation. Arthrobotrys byssisimilis is the first Arthrobotrys species reported from a bark beetle gallery, expanding the ecological scope of the genus. The integrated in vitro nematicidal activity, physiological adaptability, and multi-omics data suggest A. byssisimilis warrants further evaluation as a potential biocontrol agent against PWN, while its unique genomic features provide new molecular targets for investigating fungal-nematode interactions.
期刊介绍:
Biological control is an environmentally sound and effective means of reducing or mitigating pests and pest effects through the use of natural enemies. The aim of Biological Control is to promote this science and technology through publication of original research articles and reviews of research and theory. The journal devotes a section to reports on biotechnologies dealing with the elucidation and use of genes or gene products for the enhancement of biological control agents.
The journal encompasses biological control of viral, microbial, nematode, insect, mite, weed, and vertebrate pests in agriculture, aquatic, forest, natural resource, stored product, and urban environments. Biological control of arthropod pests of human and domestic animals is also included. Ecological, molecular, and biotechnological approaches to the understanding of biological control are welcome.