Virus taxonomy proposal summaries: a searchable and citable resource to disseminate virus taxonomy advances.

IF 4.3 4区 医学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Richard Mayne, Peter Simmonds, Donald B Smith, Evelien M Adriaenssens, Elliot J Lefkowitz, Hanna M Oksanen, Francisco Murilo Zerbini, Poliane Alfenas-Zerbini, Frank O Aylward, Juliana Freitas-Astúa, R Curtis Hendrickson, Holly R Hughes, Mart Krupovic, Jens H Kuhn, Małgorzata Łobocka, Arcady R Mushegian, Judit Penzes, Alejandro Reyes Muñoz, David L Robertson, Simon Roux, Luisa Rubino, Sead Sabanadzovic, Nobuhiro Suzuki, Dann Turner, Koenraad Van Doorslaer, Arvind Varsani
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引用次数: 0

Abstract

Taxonomic classification of cellular organisms requires the publication of descriptions and proposed names of species and the deposition of specimens. Virus taxonomy is developed through a different system of annual submission of formal taxonomy proposals (TPs) that can be submitted by anyone but are typically prepared by a study group appointed by the International Committee on Taxonomy of Viruses (ICTV) and consisting of experts on a particular group of viruses. These are initially evaluated by an expert subcommittee and by the executive committee (EC) of the ICTV. EC-approved TPs are then submitted for evaluation and a ratification vote by the wider ICTV membership. Following ratification, the new taxonomy is annually updated in the Master Species List, associated databases and bioinformatic resources. The process is consistent, creates traceability in assignments and supports a fully evaluated, hierarchical classification and nomenclature of all taxonomic ranks from species to realms. The structure also facilitates large-scale and coordinated changes to virus taxonomy, such as the recent introduction of a binomial species nomenclature.TPs are available on the ICTV website after ratification, but they are not indexed in bibliographic databases and are not easily cited. Authors of TPs do not receive citation credit for adopted proposals, and their voluntary contributions are largely invisible in the published literature. For greater visibility of TPs and their authors, the ICTV will commence the annual publication of summaries of all TPs from each ICTV subcommittee. These summaries will provide a searchable compendium of all annual taxonomy changes and additions as well as direct links to the Master Species List and other ICTV bioinformatic resources. Their publication will provide due credit and citations for their authors, form the basis for disseminating taxonomy decisions and promote greater visibility and accessibility to taxonomy changes for the virology community.

Abstract Image

Abstract Image

病毒分类学建议摘要:传播病毒分类学进展的可搜索和可引用资源。
细胞生物的分类学分类要求发表物种的描述和拟议的名称以及标本的沉积。病毒分类法是通过每年提交正式分类法提案(TPs)的不同系统制定的,任何人都可以提交正式分类法提案,但通常由国际病毒分类法委员会(ICTV)指定的一个研究小组编写,该小组由某一特定病毒组的专家组成。这些建议最初由专家小组委员会和ICTV执行委员会进行评估。然后,由欧共体批准的贸易伙伴提交评估,并由更广泛的ICTV成员投票批准。批准后,新分类法每年在《总物种名录》、相关数据库和生物信息学资源中进行更新。该过程是一致的,在分配中创建可追溯性,并支持从物种到领域的所有分类等级的全面评估,分层分类和命名。该结构还有助于对病毒分类学进行大规模和协调的改变,例如最近引入的二种命名法。TPs批准后可在ICTV网站上查阅,但没有在书目数据库中编入索引,也不容易被引用。tp的作者不会因被采纳的提案而获得引用信用,他们的自愿贡献在已发表的文献中基本上是看不见的。为了提高TPs及其作者的知名度,ICTV将开始每年出版每个ICTV小组委员会的所有TPs摘要。这些摘要将提供所有年度分类学变化和补充的可搜索概要,以及直接链接到主物种列表和其他ICTV生物信息学资源。它们的出版将为作者提供应有的荣誉和引用,形成传播分类决策的基础,并促进病毒学界对分类变化的更大可见性和可及性。
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来源期刊
Journal of General Virology
Journal of General Virology 医学-病毒学
CiteScore
7.70
自引率
2.60%
发文量
91
审稿时长
3 months
期刊介绍: JOURNAL OF GENERAL VIROLOGY (JGV), a journal of the Society for General Microbiology (SGM), publishes high-calibre research papers with high production standards, giving the journal a worldwide reputation for excellence and attracting an eminent audience.
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