Comparative Proteomic Analysis of Dental-Origin Stem Cells: Insights into Regenerative Potential.

IF 4.2 3区 医学 Q2 CELL & TISSUE ENGINEERING
Banu Çiçek Tez, Sebahat Melike Durukan, Selin Kübra Yıldır, Murat Çokkeçeci, Dudu Boyvat, Nilay Altınsoy, Fatma Fındık, Şerife Ayaz Güner, Mustafa Burak Acar, Umberto Galderisi, Servet Özcan
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Abstract

Teeth are a significant source of stem cells and have clinical importance for regenerative medicine. A human tooth harbors different kinds of stem cells in the dental pulp (DPSC) or the periodontal ligament (PDLSC). Also exfoliated teeth in childhood contain a special type of stem cells in their pulp called Stem cells from Human Exfoliated Deciduous teeth (SHED). All these stem cells have features and capacities that vary depending on their niche. Here we investigated the proteomic properties of three types of stem cells that originated from human teeth. We isolated and cultured the DPSCs, PDLSCs, and SHED cells. After validating MSC populations via immunophenotyping, we performed a mass spectrometry-based proteomic approach to identify and relatively quantify whole cell and secreted proteins. Identified proteins were evaluated by using Gene Ontology and Reactome pathway analysis tools. Our data reveal that SHED cells represented inflammation, hypoxia, and nutrient deficiency-associated ontologies in both their secretome and whole-cell proteomes. The whole-cell proteome of PDLSCs consisted of differentiation and proliferation-associated molecules while their secretory molecules were mainly associated with inflammation, ECM organization, and immune response. Among dental-originated stem cells, DPSCs appeared to be the healthiest and clinically relevant in terms of proteomic properties with their proliferation, growth factor signaling, and stemness-associated molecules in their secretome and whole-cell proteome. Obtained results demonstrated that every type of stem cell from dental origin has unique proteomic features that are altered by their location and physiological conditions. The findings may help researchers improve the dental stem-cell-based regenerative medicine approaches.

牙源性干细胞的比较蛋白质组学分析:对再生潜力的见解。
牙齿是干细胞的重要来源,对再生医学具有重要的临床意义。人的牙齿在牙髓(DPSC)或牙周韧带(PDLSC)中含有不同种类的干细胞。儿童脱落的牙齿在牙髓中含有一种特殊类型的干细胞,称为人类脱落乳牙干细胞(SHED)。所有这些干细胞都有不同的特征和能力,这取决于它们的生态位。在这里,我们研究了三种来自人类牙齿的干细胞的蛋白质组学特性。我们分离培养了DPSCs、PDLSCs和SHED细胞。在通过免疫表型验证MSC群体后,我们进行了基于质谱的蛋白质组学方法来鉴定和相对量化全细胞和分泌蛋白。利用Gene Ontology和Reactome pathway分析工具对鉴定的蛋白进行评价。我们的数据显示,SHED细胞在其分泌组和全细胞蛋白质组中都具有炎症、缺氧和营养缺乏相关的本体。PDLSCs的全细胞蛋白质组由分化和增殖相关分子组成,其分泌分子主要与炎症、ECM组织和免疫反应相关。在牙源性干细胞中,DPSCs似乎是最健康的,在蛋白质组学特性方面具有临床相关性,它们的增殖、生长因子信号以及分泌组和全细胞蛋白质组中的干细胞相关分子。获得的结果表明,每一种来自牙齿来源的干细胞都具有独特的蛋白质组学特征,这些特征会因其位置和生理条件而改变。这一发现可能有助于研究人员改进基于牙科干细胞的再生医学方法。
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来源期刊
Stem Cell Reviews and Reports
Stem Cell Reviews and Reports 医学-细胞生物学
CiteScore
9.30
自引率
4.20%
发文量
0
审稿时长
3 months
期刊介绍: The purpose of Stem Cell Reviews and Reports is to cover contemporary and emerging areas in stem cell research and regenerative medicine. The journal will consider for publication: i) solicited or unsolicited reviews of topical areas of stem cell biology that highlight, critique and synthesize recent important findings in the field. ii) full length and short reports presenting original experimental work. iii) translational stem cell studies describing results of clinical trials using stem cells as therapeutics. iv) papers focused on diseases of stem cells. v) hypothesis and commentary articles as opinion-based pieces in which authors can propose a new theory, interpretation of a controversial area in stem cell biology, or a stem cell biology question or paradigm. These articles contain more speculation than reviews, but they should be based on solid rationale. vi) protocols as peer-reviewed procedures that provide step-by-step descriptions, outlined in sufficient detail, so that both experts and novices can apply them to their own research. vii) letters to the editor and correspondence. In order to facilitate this exchange of scientific information and exciting novel ideas, the journal has created five thematic sections, focusing on: i) the role of adult stem cells in tissue regeneration; ii) progress in research on induced pluripotent stem cells, embryonic stem cells and mechanism governing embryogenesis and tissue development; iii) the role of microenvironment and extracellular microvesicles in directing the fate of stem cells; iv) mechanisms of stem cell trafficking, stem cell mobilization and homing with special emphasis on hematopoiesis; v) the role of stem cells in aging processes and cancerogenesis.
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