Eikonal Phase Retrieval: unleashing the potential of fourth-generation sources for enhanced propagation-based tomography on biological samples.

IF 3 3区 物理与天体物理
Journal of Synchrotron Radiation Pub Date : 2025-09-01 Epub Date: 2025-07-17 DOI:10.1107/S1600577525005223
Alessandro Mirone, Joseph Brunet, Theresa Urban, Hector Dejea, Leandre Admans, Renaud Boistel, Morgane Sowinski, Pierre Paleo, Henry Payno, Stijn E Verleden, Camille Berruyer, Elodie Boller, Claire L Walsh, Peter D Lee, Paul Tafforeau
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引用次数: 0

Abstract

The evolution of synchrotrons towards higher brilliance beams has increased the possible sample-to-detector propagation distances for which the source confusion circle does not lead to geometrical blurring. This makes it possible to push near-field propagation-driven phase-contrast enhancement to the limit, revealing low-contrast features that would otherwise remain hidden under excessive noise. Until now, this possibility was hindered in many objects of scientific interest by the simultaneous presence of strong phase gradient regions and low contrast features. The strong gradients, when enhanced with the now possible long propagation distances, induce such strong phase effects that the linearization assumptions of current state-of-the-art single-distance phase retrieval filters are broken, and the resulting image quality is jeopardized. Here, we introduce a new iterative phase retrieval algorithm and compare it with the Paganin phase retrieval algorithm, in both the monochromatic and polychromatic cases. In the polychromatic case the comparison was done with an extrapolated Paganin algorithm obtained by reintroducing, into our phase retrieval algorithm, the linearization approximations underlying the Paganin forward model. Our work provides an innovative algorithm that efficiently performs the phase retrieval task over the entire near-field range, producing images of superior quality for mixed attenuation objects. Our tests on data with shorter propagation distances show that the artifacts, which our algorithm effectively addresses, are present already in more standard third-generation synchrotron setups. This highlights the potential broad applicability of the Eikonal Phase Retrieval method.

Eikonal相位检索:释放第四代源的潜力,增强生物样品的基于传播的断层扫描。
同步加速器向更高亮度光束的发展增加了可能的样品到探测器的传播距离,而源混淆圈不会导致几何模糊。这使得有可能将近场传播驱动的相衬增强推向极限,揭示低对比度特征,否则将在过度噪声下隐藏。到目前为止,由于同时存在强相位梯度区域和低对比度特征,这种可能性在许多科学兴趣对象中受到阻碍。当强梯度随着现在可能的长传播距离而增强时,会产生如此强烈的相位效应,以至于当前最先进的单距离相位检索滤波器的线性化假设被打破,从而危及图像质量。本文介绍了一种新的迭代相位检索算法,并将其与Paganin相位检索算法在单色和多色情况下进行了比较。在多色情况下,通过在相位检索算法中重新引入Paganin正演模型的线性化近似得到外推Paganin算法进行比较。我们的工作提供了一种创新的算法,可以在整个近场范围内有效地执行相位检索任务,为混合衰减对象产生高质量的图像。我们对传播距离较短的数据进行的测试表明,我们的算法有效解决的伪影已经存在于更标准的第三代同步加速器设置中。这突出了Eikonal相位检索方法潜在的广泛适用性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Synchrotron Radiation
Journal of Synchrotron Radiation INSTRUMENTS & INSTRUMENTATIONOPTICS&-OPTICS
CiteScore
5.60
自引率
12.00%
发文量
289
审稿时长
1 months
期刊介绍: Synchrotron radiation research is rapidly expanding with many new sources of radiation being created globally. Synchrotron radiation plays a leading role in pure science and in emerging technologies. The Journal of Synchrotron Radiation provides comprehensive coverage of the entire field of synchrotron radiation and free-electron laser research including instrumentation, theory, computing and scientific applications in areas such as biology, nanoscience and materials science. Rapid publication ensures an up-to-date information resource for scientists and engineers in the field.
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