Chaojie Zhang, Shengjia Chen, Ozkan Cigdem, Haresh Rengaraj Rajamohan, Kyunghyun Cho, Richard Kijowski, Cem M Deniz
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{"title":"MR-Transformer: A Vision Transformer-based Deep Learning Model for Total Knee Replacement Prediction Using MRI.","authors":"Chaojie Zhang, Shengjia Chen, Ozkan Cigdem, Haresh Rengaraj Rajamohan, Kyunghyun Cho, Richard Kijowski, Cem M Deniz","doi":"10.1148/ryai.240373","DOIUrl":null,"url":null,"abstract":"<p><p><i>\"Just Accepted\" papers have undergone full peer review and have been accepted for publication in <i>Radiology: Artificial Intelligence</i>. This article will undergo copyediting, layout, and proof review before it is published in its final version. Please note that during production of the final copyedited article, errors may be discovered which could affect the content.</i> Purpose To develop a transformer-based deep learning model-MR-Transformer-that leverages ImageNet pretraining and three-dimensional (3D) spatial correlations to predict the progression of knee osteoarthritis to TKR using MRI. Materials and Methods This retrospective study included 353 case-control matched pairs of coronal intermediate-weighted turbo spin-echo (COR-IW-TSE) and sagittal intermediate-weighted turbo spin-echo with fat suppression (SAG-IW-TSE-FS) knee MRIs from the Osteoarthritis Initiative (OAI) database, with a follow-up period up to 9 years, and 270 case-control matched pairs of coronal short-tau inversion recovery (COR-STIR) and sagittal proton density fat-saturated (SAG-PD-FAT-SAT) knee MRIs from the Multicenter Osteoarthritis Study (MOST) database, with a follow-up period up to 7 years. Performance of the MR-Transformer to predict the progression of knee osteoarthritis was compared with that of existing state-of-the-art deep learning models (TSE-Net, 3DMeT, and MRNet) using sevenfold nested cross-validation across the four MRI tissue sequences. Results MR-Transformer achieved areas under the receiver operating characteristic curves (AUCs) of 0.88 (95% CI: 0.85, 0.91), 0.88 (95% CI: 0.85, 0.90), 0.86 (95% CI: 0.82, 0.89), and 0.84 (95% CI: 0.81, 0.87) for COR-IW-TSE, SAG-IW-TSE-FS, COR-STIR, and SAG-PD-FAT-SAT, respectively. The model achieved a higher AUC than that of 3DMeT for all MRI sequences (<i>P</i> < .001). The model showed the highest sensitivity of 83% (95% CI: 78, 87%) and specificity of 83% (95% CI: 76, 88%) for the COR-IW-TSE MRI sequence. Conclusion Compared with the existing deep learning models, the MR-Transformer exhibited state-of-the-art performance in predicting the progression of knee osteoarthritis to TKR using MRIs. ©RSNA, 2025.</p>","PeriodicalId":29787,"journal":{"name":"Radiology-Artificial Intelligence","volume":" ","pages":"e240373"},"PeriodicalIF":13.2000,"publicationDate":"2025-07-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Radiology-Artificial Intelligence","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1148/ryai.240373","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE","Score":null,"Total":0}
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Abstract
"Just Accepted" papers have undergone full peer review and have been accepted for publication in Radiology: Artificial Intelligence . This article will undergo copyediting, layout, and proof review before it is published in its final version. Please note that during production of the final copyedited article, errors may be discovered which could affect the content. Purpose To develop a transformer-based deep learning model-MR-Transformer-that leverages ImageNet pretraining and three-dimensional (3D) spatial correlations to predict the progression of knee osteoarthritis to TKR using MRI. Materials and Methods This retrospective study included 353 case-control matched pairs of coronal intermediate-weighted turbo spin-echo (COR-IW-TSE) and sagittal intermediate-weighted turbo spin-echo with fat suppression (SAG-IW-TSE-FS) knee MRIs from the Osteoarthritis Initiative (OAI) database, with a follow-up period up to 9 years, and 270 case-control matched pairs of coronal short-tau inversion recovery (COR-STIR) and sagittal proton density fat-saturated (SAG-PD-FAT-SAT) knee MRIs from the Multicenter Osteoarthritis Study (MOST) database, with a follow-up period up to 7 years. Performance of the MR-Transformer to predict the progression of knee osteoarthritis was compared with that of existing state-of-the-art deep learning models (TSE-Net, 3DMeT, and MRNet) using sevenfold nested cross-validation across the four MRI tissue sequences. Results MR-Transformer achieved areas under the receiver operating characteristic curves (AUCs) of 0.88 (95% CI: 0.85, 0.91), 0.88 (95% CI: 0.85, 0.90), 0.86 (95% CI: 0.82, 0.89), and 0.84 (95% CI: 0.81, 0.87) for COR-IW-TSE, SAG-IW-TSE-FS, COR-STIR, and SAG-PD-FAT-SAT, respectively. The model achieved a higher AUC than that of 3DMeT for all MRI sequences (P < .001). The model showed the highest sensitivity of 83% (95% CI: 78, 87%) and specificity of 83% (95% CI: 76, 88%) for the COR-IW-TSE MRI sequence. Conclusion Compared with the existing deep learning models, the MR-Transformer exhibited state-of-the-art performance in predicting the progression of knee osteoarthritis to TKR using MRIs. ©RSNA, 2025.
MR-Transformer:一种基于视觉变压器的深度学习模型,用于MRI全膝关节置换术预测。
“刚刚接受”的论文经过了全面的同行评审,并已被接受发表在《放射学:人工智能》杂志上。这篇文章将经过编辑,布局和校样审查,然后在其最终版本出版。请注意,在最终编辑文章的制作过程中,可能会发现可能影响内容的错误。目的:开发基于变压器的深度学习模型mr - transformer,该模型利用ImageNet预训练和三维(3D)空间相关性,通过MRI预测膝关节骨关节炎向TKR的进展。材料和方法本回顾性研究包括353对病例对照匹配的冠状中权重涡轮自旋回波(COR-IW-TSE)和矢状中权重涡轮自旋回波伴脂肪抑制(sagw - tse - fs)膝关节mri,来自骨关节炎倡议(OAI)数据库,随访时间长达9年。以及来自多中心骨关节炎研究(MOST)数据库的270对匹配病例对照的冠状面短tau反转恢复(COR-STIR)和矢状面质子密度脂肪饱和(SAG-PD-FAT-SAT)膝关节mri,随访期长达7年。通过对四个MRI组织序列进行七倍嵌套交叉验证,将MR-Transformer预测膝关节骨性关节炎进展的性能与现有最先进的深度学习模型(TSE-Net、3DMeT和MRNet)进行比较。结果MR-Transformer在COR-IW-TSE、SAG-IW-TSE-FS、COR-STIR和SAG-PD-FAT-SAT的受试者工作特征曲线(auc)下的面积分别为0.88 (95% CI: 0.85, 0.91)、0.88 (95% CI: 0.85, 0.90)、0.86 (95% CI: 0.82, 0.89)和0.84 (95% CI: 0.81, 0.87)。在所有MRI序列上,该模型的AUC均高于3DMeT (P < 0.001)。该模型对co - iw - tse MRI序列的最高敏感性为83% (95% CI: 78,87%),特异性为83% (95% CI: 76,88%)。与现有的深度学习模型相比,MR-Transformer在利用mri预测膝关节骨关节炎向TKR的进展方面表现出了最先进的性能。©RSNA, 2025年。
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