[Bioinformatics analysis and purification of Treponema pallidum OmpH protein and preparation of polyclonal antibody].

Q3 Medicine
X Wu, J Jiang, X F Wang, M Wang, H Yang, S G He, Y D Cao
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引用次数: 0

Abstract

Objective: To analyze and predict the biological properties and function of Treponema pallidum OmpH protein by bioinformatics methods, purify the target protein, and prepare polyclonal antibodies. Methods: From January 2024 to February 2025, the research team from the Department of Clinical Laboratory at The First Affiliated Hospital of Hunan Traditional Chinese Medical College (Hunan Province Directly Affiliated Traditional Chinese Medical Hospital) conducted a study employing integrative approaches combining bioinformatics analysis with animal experimentation. During this investigation, the coding sequence of the T. pallidum outer membrane protein H (TpOmpH) was systematically retrieved from the National Center for Biotechnology Information (NCBI) database. And the bioinformatics tools, such as Protparam, Protscale,SignalP 6.0,NetNGlyc-1.0,TMHMM2.0,NetPhos-3.1,SOPMA,AlphaFold3,IEDB,STRING,C-immsim were used to analyze and predict the biological and immunological characteristics of TpOmpH protein. The full length of TpOmpH gene was synthesized and was cloned into the pET28a to construct the recombinant plasmid pET28a-TpOmpH. The the expression of target protein was induced by IPTG and was purified using affinity chromatography. The TpOmpH protein was used to immunize mice and the anti-serum was harvested, then the titer of antibody was detected. Results: TpOmpH is a hydrophobic outer membrane protein with a molecular weight of 19.7 kDa and strong stability. The TpOmpH protein is located outside the cell membrane and contains 11 serine, 4 threonine, and 1 tyrosine phosphorylation site, but no glycosylation sites. The 77.91% of the amino acids in TpOmpH protein are alpha helix, 8.72% are extended strand, 10.47% are random coils, and 2.91% are beta turns. The tertiary structure predicted by AlphaFold3 is in its optimal state. The TpOmpH protein has 4 CTL epitopes, 4 linear epitopes, and 5 spatial epitopes. The TpOmpH protein can interact with Tp92,MutS,SurA,TPANIC_0600 and other proteins which may be involved in Tp invasion. TpOmpH protein can induce an increase in B cell count, antibody content, Th cell count, NK cell count, as well as the expression of various cytokines. High purity TpOmpH protein was obtained through Ni2+ affinity chromatography, which is consistent with the theoretical molecular weight. TpOmpH protein can induce mice to secrete polyclonal antibodies with antibody titers higher than 1∶10 000. Conclusion: TpOmpH protein is a hydrophobic protein located on the outer membrane of Tp, can induce mice to secrete high titer antibodies, which providing experimental basis for the pathogenesis of Tp and vaccine development.

【梅毒螺旋体OmpH蛋白的生物信息学分析、纯化及多克隆抗体制备】。
目的:应用生物信息学方法分析和预测梅毒螺旋体OmpH蛋白的生物学特性和功能,纯化目的蛋白,制备多克隆抗体。方法:2024年1月至2025年2月,湖南中医药学院第一附属医院(湖南省直属中医医院)检验科课课组采用生物信息学分析与动物实验相结合的方法进行研究。在研究过程中,系统地从美国国家生物技术信息中心(NCBI)数据库中检索了T. pallidum外膜蛋白H (TpOmpH)编码序列。采用Protparam、Protscale、SignalP 6.0、NetNGlyc-1.0、TMHMM2.0、NetPhos-3.1、SOPMA、AlphaFold3、IEDB、STRING、C-immsim等生物信息学工具分析和预测TpOmpH蛋白的生物学和免疫学特性。合成TpOmpH全长基因,并将其克隆到pET28a中,构建重组质粒pET28a-TpOmpH。目的蛋白通过IPTG诱导表达,通过亲和层析纯化。用TpOmpH蛋白免疫小鼠,获得抗血清,检测抗体滴度。结果:TpOmpH是一种疏水外膜蛋白,分子量为19.7 kDa,稳定性强。TpOmpH蛋白位于细胞膜外,含有11个丝氨酸、4个苏氨酸和1个酪氨酸磷酸化位点,但没有糖基化位点。TpOmpH蛋白中77.91%的氨基酸为α螺旋,8.72%为延伸链,10.47%为随机线圈,2.91%为β匝。AlphaFold3预测的三级结构处于最优状态。TpOmpH蛋白具有4个CTL表位、4个线性表位和5个空间表位。TpOmpH蛋白可与Tp92、MutS、SurA、TPANIC_0600等可能参与Tp侵袭的蛋白相互作用。TpOmpH蛋白可诱导B细胞计数、抗体含量、Th细胞计数、NK细胞计数以及各种细胞因子的表达增加。通过Ni2+亲和层析得到高纯度的TpOmpH蛋白,与理论分子量一致。TpOmpH蛋白可诱导小鼠分泌抗体效价高于1∶10 000的多克隆抗体。结论:TpOmpH蛋白是一种位于Tp外膜上的疏水蛋白,可诱导小鼠分泌高效价抗体,为Tp发病机制及疫苗研制提供实验依据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
中华预防医学杂志
中华预防医学杂志 Medicine-Medicine (all)
CiteScore
1.20
自引率
0.00%
发文量
12678
期刊介绍: Chinese Journal of Preventive Medicine (CJPM), the successor to Chinese Health Journal , was initiated on October 1, 1953. In 1960, it was amalgamated with the Chinese Medical Journal and the Journal of Medical History and Health Care , and thereafter, was renamed as People’s Care . On November 25, 1978, the publication was denominated as Chinese Journal of Preventive Medicine . The contents of CJPM deal with a wide range of disciplines and technologies including epidemiology, environmental health, nutrition and food hygiene, occupational health, hygiene for children and adolescents, radiological health, toxicology, biostatistics, social medicine, pathogenic and epidemiological research in malignant tumor, surveillance and immunization.
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