Tong Ye Wang, Amit Bijlani, Emily Hoi Pui Chao, Philip E Johnson, Sergey N Krylov
{"title":"A Browser-Based Tool for Assessing Accuracy of Isothermal Titration Calorimetry-Derived Parameters: K<sub>d</sub>, ΔH°, and n.","authors":"Tong Ye Wang, Amit Bijlani, Emily Hoi Pui Chao, Philip E Johnson, Sergey N Krylov","doi":"10.1002/cbic.202500194","DOIUrl":null,"url":null,"abstract":"<p><p>Accurate determination of equilibrium dissociation constants (K<sub>d</sub>) is essential for decision-making in drug discovery and diagnostics development. Isothermal titration calorimetry (ITC), which requires no reactant labeling or immobilization, is commonly used to validate K<sub>d</sub> values from high-throughput screens. Yet, like other methods, ITC results can be skewed by systematic errors in reactant concentrations, a fact that is often overlooked, potentially leading to misinformed decisions. To address this, accuracy confidence intervals (ACI)-ITC is developed, a browser-based tool that calculates ACI for ITC-derived parameters, offering probabilistic ranges for the true values of K<sub>d</sub>, enthalpy change (ΔH°), and binding stoichiometry (n). Unlike traditional confidence intervals that consider only random errors, ACI-ITC explicitly accounts for systematic errors, providing a more accurate framework to assess experimental reliability. Alongside a user-friendly interface, it offers detailed guidance for determining uncertainties in concentrations and heat, which are critical inputs for assessing measurement accuracy. The tool's browser-based accessibility (https://aci.sci.yorku.ca) eliminates the need for specialized installation, enabling cross-platform compatibility and streamlining accuracy assessments. By highlighting the importance of systematic errors and providing a structured approach for their evaluation, ACI-ITC supports more robust conclusions, fosters better-informed decisions based on ITC measurements, and enhances the reliability of research findings.</p>","PeriodicalId":140,"journal":{"name":"ChemBioChem","volume":" ","pages":"e2500194"},"PeriodicalIF":2.6000,"publicationDate":"2025-07-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"ChemBioChem","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1002/cbic.202500194","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
Accurate determination of equilibrium dissociation constants (Kd) is essential for decision-making in drug discovery and diagnostics development. Isothermal titration calorimetry (ITC), which requires no reactant labeling or immobilization, is commonly used to validate Kd values from high-throughput screens. Yet, like other methods, ITC results can be skewed by systematic errors in reactant concentrations, a fact that is often overlooked, potentially leading to misinformed decisions. To address this, accuracy confidence intervals (ACI)-ITC is developed, a browser-based tool that calculates ACI for ITC-derived parameters, offering probabilistic ranges for the true values of Kd, enthalpy change (ΔH°), and binding stoichiometry (n). Unlike traditional confidence intervals that consider only random errors, ACI-ITC explicitly accounts for systematic errors, providing a more accurate framework to assess experimental reliability. Alongside a user-friendly interface, it offers detailed guidance for determining uncertainties in concentrations and heat, which are critical inputs for assessing measurement accuracy. The tool's browser-based accessibility (https://aci.sci.yorku.ca) eliminates the need for specialized installation, enabling cross-platform compatibility and streamlining accuracy assessments. By highlighting the importance of systematic errors and providing a structured approach for their evaluation, ACI-ITC supports more robust conclusions, fosters better-informed decisions based on ITC measurements, and enhances the reliability of research findings.
期刊介绍:
ChemBioChem (Impact Factor 2018: 2.641) publishes important breakthroughs across all areas at the interface of chemistry and biology, including the fields of chemical biology, bioorganic chemistry, bioinorganic chemistry, synthetic biology, biocatalysis, bionanotechnology, and biomaterials. It is published on behalf of Chemistry Europe, an association of 16 European chemical societies, and supported by the Asian Chemical Editorial Society (ACES).