Genetic Variants in the Extracellular Matrix Gene TNXB Predicted to Alter Fibronectin III Domains in Arterial Aneurysmal and Dissection Diseases.

IF 5.6 2区 生物学
Charlene Norgan Radler, Tianci Wang, Jaden LeGate, Lily Crone, Parminder Deo, Jacob Wortley, Peyton Moore, Griffin Bryant, Katherine Smitherman, Mohanakrishnan Sathyamoorthy
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引用次数: 0

Abstract

Arterial aneurysms are vascular conditions associated with life-threatening consequences in patients, such as dissection and rupture. Understanding their genetic basis is an evolving field, driven by the robust reporting of genetic variants associated with aneurysms in patients. In this study, we present clinical and genetic data from nine unrelated subjects with arterial aneurysms who were identified to harbor rare variants in the TNXB gene, mainly affecting fibronectin type III (FNIII) domains. The cohort included three female and six male subjects with a mean age of 53.5 years (SD = 14.4). The most frequently affected vascular territory was the thoracic ascending aorta (n = 7). A range of pathogenic impacts was predicted via multiple in silico tools that analyze evolutionary conservation and biochemical properties. Computational protein structure modeling with AlphaFold 3 predicted domain-specific alterations across multiple FNIII regions for four unique missense variants and one in-frame deletion, and premature protein truncation resulting from two frameshift variants. To our knowledge, this study is one of the first and largest to associate TNXB variants with arterial aneurysmal disease. Our findings demonstrate the potential of computational genomics and structural modeling to advance the understanding of extracellular matrix gene alterations in aneurysm pathogenesis.

细胞外基质基因TNXB的遗传变异预测会改变动脉动脉瘤和夹层疾病中纤维连接蛋白III结构域
动脉动脉瘤是一种与危及生命的后果相关的血管疾病,如夹层和破裂。了解它们的遗传基础是一个不断发展的领域,受到与患者动脉瘤相关的遗传变异的大量报道的推动。在这项研究中,我们提供了9例不相关的动脉瘤患者的临床和遗传数据,这些患者被鉴定为TNXB基因的罕见变异,主要影响纤维连接蛋白III型(FNIII)结构域。该队列包括3名女性和6名男性,平均年龄为53.5岁(SD = 14.4)。最常受影响的血管区域是胸升主动脉(n = 7)。通过多种分析进化守恒和生化特性的计算机工具预测了一系列的致病影响。利用AlphaFold 3的计算蛋白质结构建模预测了四个独特的错义变体和一个帧内缺失的多个FNIII区域的结构域特异性改变,以及两个移码变体导致的蛋白质过早截断。据我们所知,这项研究是第一个也是最大的将TNXB变异与动脉动脉瘤疾病联系起来的研究之一。我们的研究结果证明了计算基因组学和结构建模的潜力,以促进对动脉瘤发病过程中细胞外基质基因改变的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
自引率
10.70%
发文量
13472
审稿时长
1.7 months
期刊介绍: The International Journal of Molecular Sciences (ISSN 1422-0067) provides an advanced forum for chemistry, molecular physics (chemical physics and physical chemistry) and molecular biology. It publishes research articles, reviews, communications and short notes. Our aim is to encourage scientists to publish their theoretical and experimental results in as much detail as possible. Therefore, there is no restriction on the length of the papers or the number of electronics supplementary files. For articles with computational results, the full experimental details must be provided so that the results can be reproduced. Electronic files regarding the full details of the calculation and experimental procedure, if unable to be published in a normal way, can be deposited as supplementary material (including animated pictures, videos, interactive Excel sheets, software executables and others).
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