Efficient data filtering with multiple group conditions: a command tool for bioinformatics data analysis.

IF 4.6 4区 农林科学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
aBIOTECH Pub Date : 2025-03-13 eCollection Date: 2025-06-01 DOI:10.1007/s42994-025-00207-6
Wenpeng Deng, Jianye Chang, Alun Li, He Xie, Jue Ruan
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引用次数: 0

Abstract

Bioinformatics analysis often requires the filtering of multi-datasets, based on frequency or frequency of occurrence, for decisions on retention or deletion. Existing tools for this purpose often present a challenge with complex installation, which necessitate custom coding, thereby impeding efficient data processing activities. To address this issue, Filterx, a user-friendly command line tool that written in C language, was developed that supports multi-condition filtering, based on frequency or occurrence. This tool enables users to complete the data processing tasks through a simple command line, greatly reducing both workload and data processing time. In addition, future development of this tool could facilitate its integration into various bioinformatics data analysis pipelines.

具有多组条件的高效数据过滤:用于生物信息学数据分析的命令工具。
生物信息学分析通常需要根据出现的频率或频率对多个数据集进行过滤,以决定保留或删除。用于此目的的现有工具通常面临复杂安装的挑战,这需要自定义编码,从而阻碍了有效的数据处理活动。为了解决这个问题,Filterx是一个用C语言编写的用户友好的命令行工具,它支持基于频率或发生次数的多条件过滤。该工具使用户能够通过简单的命令行完成数据处理任务,大大减少了工作量和数据处理时间。此外,该工具的未来发展可以促进其集成到各种生物信息学数据分析管道中。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
7.70
自引率
2.80%
发文量
0
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