Exploring OmpA of Orientia tsutsugamushi to design novel multi-epitope vaccine against scrub typhus: an immunoinformatics approach.

IF 3.8 2区 化学 Q2 CHEMISTRY, APPLIED
Shakshi Shah, Ankita Sharma, Kanika Choudhary, Rakesh Kumar, Vikram Singh, Amit Kumar Sharma, Sunil Kumar, Dixit Sharma
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引用次数: 0

Abstract

Scrub typhus is a commonly neglected infectious febrile illness caused by an obligate intracellular bacterium known as Orientia tsutsugamushi. It is a major health problem, affecting one million people annually, and poses threat to one billion people worldwide. There is always the escalating threat posed by the development of antibiotic resistance in the forthcoming future which emphasizes on urgency of the development of vaccine against Orientia tsutsugamushi. Despite eight decades of research and development, currently there is no viable vaccine available against scrub typhus. Outer membrane protein A (OmpA) is highly conserved and immunogenic across 51 geographically diverse isolates of Orientia tsutsugamishi. The multi-epitope vaccine was constructed by integrating four B-cell, four MHC-I, and four MHC-II epitopes linked together using specific linkers. The cholera enterotoxin subunit B is linked with the vaccine construct at N-terminal as an adjuvant. The constructed vaccine is 329 amino acid long, highly antigenic, non-allergen, non-toxic, soluble and has 36.3 kDa molecular weight. The molecular docking of vaccine construct with TLR receptors showed strong binding affinity. The interactions among vaccine and TLR receptors were analyzed using PDBsum. The in silico immune simulation of constructed vaccine showed ability to trigger immune response as shown by augmentation in T-cell and B-cell population. The current study provides the way forward for controlling the febrile disease scrub typhus.

用免疫信息学方法研究恙虫病东方体的OmpA以设计新型恙虫病多表位疫苗。
恙虫病是一种通常被忽视的传染性发热疾病,由一种称为恙虫病东方体的专性细胞内细菌引起。这是一个重大的健康问题,每年影响100万人,并对全世界10亿人构成威胁。在即将到来的未来,抗生素耐药性的发展所构成的威胁总是不断升级,这强调了开发针对恙虫病东方体的疫苗的紧迫性。尽管经过了80年的研究和发展,目前还没有针对恙虫病的可行疫苗。外膜蛋白A (OmpA)在51个不同地理位置的恙虫东体分离株中具有高度保守性和免疫原性。将4个b细胞、4个MHC-I和4个MHC-II表位通过特异性连接物连接在一起,构建了多表位疫苗。霍乱肠毒素亚基B在n端作为佐剂与疫苗结构相连接。该疫苗全长329个氨基酸,具有高抗原性、无过敏原、无毒、可溶性,分子量为36.3 kDa。疫苗构建体与TLR受体的分子对接表现出较强的结合亲和力。采用PDBsum分析疫苗与TLR受体的相互作用。构建的疫苗在计算机上的免疫模拟显示,其在t细胞和b细胞群体中的免疫应答能力增强。本研究为恙虫病的防治提供了新的思路。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Molecular Diversity
Molecular Diversity 化学-化学综合
CiteScore
7.30
自引率
7.90%
发文量
219
审稿时长
2.7 months
期刊介绍: Molecular Diversity is a new publication forum for the rapid publication of refereed papers dedicated to describing the development, application and theory of molecular diversity and combinatorial chemistry in basic and applied research and drug discovery. The journal publishes both short and full papers, perspectives, news and reviews dealing with all aspects of the generation of molecular diversity, application of diversity for screening against alternative targets of all types (biological, biophysical, technological), analysis of results obtained and their application in various scientific disciplines/approaches including: combinatorial chemistry and parallel synthesis; small molecule libraries; microwave synthesis; flow synthesis; fluorous synthesis; diversity oriented synthesis (DOS); nanoreactors; click chemistry; multiplex technologies; fragment- and ligand-based design; structure/function/SAR; computational chemistry and molecular design; chemoinformatics; screening techniques and screening interfaces; analytical and purification methods; robotics, automation and miniaturization; targeted libraries; display libraries; peptides and peptoids; proteins; oligonucleotides; carbohydrates; natural diversity; new methods of library formulation and deconvolution; directed evolution, origin of life and recombination; search techniques, landscapes, random chemistry and more;
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