Nonheme Fe 1,3-nitrogen migratases for asymmetric noncanonical amino acid synthesis

IF 12.9 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Liu-Peng Zhao, Huichong Liu, Binh Khanh Mai, Yu Zhang, Lida Cheng, Peng Liu, Yang Yang
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引用次数: 0

Abstract

Nonheme Fe enzymes are biologically important enzymes that use iron at their active site without incorporating a heme cofactor. Nonetheless, these enzymes remain largely underexploited in the development of new-to-nature biocatalytic reactions with synthetic utility. Here we report the repurposing and directed evolution of plant-derived nonheme Fe enzyme 1-aminocyclopropane-1-carboxylic acid oxidase into a nitrogen migratase to enable the efficient and enantioselective 1,3-nitrogen migration reaction on both secondary C(sp3)–H and tertiary C(sp3)–H bonds from racemic substrates. This results in enantioenriched α-trisubstituted as well as α-tetrasubstituted noncanonical amino acids with broad utility. Combined experimental and computational studies reveal an unusual stereoablative hydrogen atom transfer followed by a stereoselective C–N bond-forming radical rebound mechanism, which accounts for the excellent enantiocontrol observed in biocatalytic amino acid synthesis. The multiple open coordination sites of nonheme Fe enable simultaneous binding of reaction partners, offering opportunities for biocatalysis beyond heme enzymes.

Abstract Image

非对称非规范氨基酸合成的非血红素Fe 1,3-氮迁移酶
非血红素铁酶是生物学上重要的酶,在其活性位点使用铁而不结合血红素辅助因子。尽管如此,这些酶在开发具有合成效用的新型自然生物催化反应方面仍未得到充分利用。在这里,我们报道了植物源非血红素铁酶1-氨基环丙烷-1-羧酸氧化酶的重新用途和定向进化为氮迁移酶,以实现从外消旋底物在二级C(sp3) -H和叔C(sp3) -H键上高效和对映选择性的1,3-氮迁移反应。这就产生了对映体富集的α-三取代和α-四取代的非规范氨基酸,具有广泛的用途。实验和计算相结合的研究揭示了一个不寻常的立体蚀变氢原子转移,随后是一个立体选择性的C-N键形成自由基反弹机制,这解释了在生物催化氨基酸合成中观察到的良好的对映控制。非血红素铁的多个开放配位位点可以同时结合反应伙伴,为血红素酶以外的生物催化提供了机会。
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来源期刊
Nature chemical biology
Nature chemical biology 生物-生化与分子生物学
CiteScore
23.90
自引率
1.40%
发文量
238
审稿时长
12 months
期刊介绍: Nature Chemical Biology stands as an esteemed international monthly journal, offering a prominent platform for the chemical biology community to showcase top-tier original research and commentary. Operating at the crossroads of chemistry, biology, and related disciplines, chemical biology utilizes scientific ideas and approaches to comprehend and manipulate biological systems with molecular precision. The journal embraces contributions from the growing community of chemical biologists, encompassing insights from chemists applying principles and tools to biological inquiries and biologists striving to comprehend and control molecular-level biological processes. We prioritize studies unveiling significant conceptual or practical advancements in areas where chemistry and biology intersect, emphasizing basic research, especially those reporting novel chemical or biological tools and offering profound molecular-level insights into underlying biological mechanisms. Nature Chemical Biology also welcomes manuscripts describing applied molecular studies at the chemistry-biology interface due to the broad utility of chemical biology approaches in manipulating or engineering biological systems. Irrespective of scientific focus, we actively seek submissions that creatively blend chemistry and biology, particularly those providing substantial conceptual or methodological breakthroughs with the potential to open innovative research avenues. The journal maintains a robust and impartial review process, emphasizing thorough chemical and biological characterization.
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