Prevalence of Salmonella enterica Serotype 4,[5],12:i:- from Human Sources: Antimicrobial Resistance, Genotypic Diversity and Emergence of Carbapenem Resistance - China, 2017-2023.

IF 2.9 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH
Huiying Sun, Zhigang Cui, Xiaoli Du, Fenxia Fan, Bowei Sun, Baowei Diao, Haijian Zhou, Biao Kan, Meiying Yan
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引用次数: 0

Abstract

Introduction: Salmonella 4,[5],12:i:-, a globally emerging pathogen with multidrug resistance (MDR), is spreading in China. Nationwide data on the antimicrobial resistance (AMR) and genomic characteristics of Salmonella 4,[5],12:i:- from human sources in China are scarce. This study aimed to characterize the prevalence, genetic diversity, and AMR profiles of Salmonella 4,[5],12:i:- in China.

Methods: All information, including geographical data, antimicrobial susceptibility test results, and whole-genome sequences, was extracted from the Chinese Pathogen Identification Network database from 2017 to 2023. Antimicrobial resistance phenotypes of 2,736 human-derived isolates were determined, and genomic analysis was applied to assess their genetic heterogeneity. Additionally, resistance genes were detected.

Results: Salmonella 4,[5],12:i:- strains exhibited varying levels of resistance to the tested antibiotics, with an overall resistance rate of 98.83%, MDR rate of 87.98%, and cefotaxime resistance of 25.91%. An increasing trend was observed for resistance to key antibiotics and AMR determinants from 2020-2023. Whole-genome analysis revealed five clades with high genetic diversity (A-E), with 97.33% belonging to ST34. Clade D carried a significant proportion of ESBL genes. Moreover, we identified 15 meropenem-resistant isolates primarily harboring widely distributed plasmids containing multiple resistance genes, including bla NDM-5 and bla OXA-10.

Conclusion: Salmonella 4,[5],12:i:- is highly sporadic in China but remains phylogenetically linked to the prevalent MDR clone with a distinct resistance profile worldwide. The emergence of elevated resistance to third-generation cephalosporins and sharp rise in carbapenem resistance, coupled with the detection of plasmid-mediated resistance determinants, suggests the evolution of endemic MDR clones circulating within China. These findings emphasize the need for enhanced surveillance, stricter regulations on antibiotic use in agriculture, comprehensive risk factor surveys, and targeted interventions to prevent outbreaks.

人源肠沙门氏菌血清4型、b[5]、12:i:-的流行情况:耐药性、基因型多样性及碳青霉烯类耐药性的出现——中国,2017-2023。
沙门氏菌4,b[5],12:i:-是一种全球新发的耐多药病原菌,正在中国蔓延。在中国,关于人源沙门氏菌4,bbbb12:i:-的抗微生物药物耐药性(AMR)和基因组特征的全国性数据很少。本研究旨在了解沙门氏菌4、b[5]、12:i:-在中国的流行情况、遗传多样性和AMR谱。方法:从2017 - 2023年中国病原体鉴定网络数据库中提取所有信息,包括地理数据、药敏试验结果和全基因组序列。测定了2736株人源分离株的抗微生物药物耐药性表型,并应用基因组分析评估其遗传异质性。此外,还检测到抗性基因。结果:沙门氏菌4、[5]、12:i:-株对试验抗生素均表现出不同程度的耐药率,总体耐药率为98.83%,耐多药率为87.98%,头孢噻肟耐药率为25.91%。2020-2023年对主要抗生素和AMR决定因素的耐药性呈上升趋势。全基因组分析显示5支具有较高的遗传多样性(A-E),其中97.33%属于ST34。进化支D携带ESBL基因的比例显著。此外,我们鉴定了15株美罗培宁耐药菌株,主要携带广泛分布的含有多种耐药基因的质粒,包括bla NDM-5和bla OXA-10。结论:沙门氏菌4,b[5],12:i:-在中国是高度散发性的,但在系统发育上与世界范围内普遍存在的耐多药克隆存在联系。对第三代头孢菌素耐药性的升高和碳青霉烯类耐药性的急剧上升,加上质粒介导的耐药决定因素的检测,表明在中国流行的地方性耐多药克隆的进化。这些发现强调有必要加强监测,对农业中抗生素的使用实行更严格的规定,进行全面的风险因素调查,并采取有针对性的干预措施,以防止疫情的爆发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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