Regularized Second-Order Møller-Plesset Theory: Linear Scaling Implementation and Assessment on Large-Molecule Problems.

IF 5.5 1区 化学 Q2 CHEMISTRY, PHYSICAL
Zhenling Wang,Tianyi Shi,Weiliang Luo,Heather J Kulik,Yang Liu,Xiaoye S Li,Martin Head-Gordon
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引用次数: 0

Abstract

Formally fifth-order scaling with molecular size, second-order Møller-Plesset (MP2) theory is widely used in its own right, and as a component of double hybrid density functional theory. Nevertheless, MP2 is well-known to have limited accuracy for large intermolecular interactions, and the MP2 energy is not bounded from below. Regularized MP2 methods aim to address these issues without changing the formal fifth-order scaling and are therefore of interest as more accurate and robust alternatives. In this work, we report a linear scaling algorithm with shared and distributed memory parallel implementations, for the evaluation of two regularized MP2 methods: κ-MP2 and the size-consistent second-order Brillouin-Wigner perturbation theory (BW-s2). The algorithm uses a single numerical threshold to control accuracy, which is demonstrated to yield a roughly 10-fold reduction in numerical error for each factor of 10 reduction in the threshold. The scaling of time-to-solution is assessed as a function of molecule size (up to 1800 atoms and 25000 atomic orbitals), the choice of threshold, and the number of processors (up to 2000 cores), for a range of systems including linear alkanes and three-dimensional complexes. The results show an earlier crossover against the canonical implementation for BW-s2 than for either MP2 or κ-MP2. The new implementation is used to evaluate the accuracy of the κ-MP2 and BW-s2 methods for some of the largest test sets of intermolecular interactions for which coupled cluster benchmark data are available, including IONPI19, L7, S12L, and C60ISO. The results show that κ-MP2 and BW-s2 perform far better than MP2. Additional tests of κ-MP2 and BW-s2 are reported for the case of short-range amino acid interactions, where MP2 performs exceptionally well.
正则二阶Møller-Plesset理论:大分子问题的线性标度实现与评估。
二阶Møller-Plesset (MP2)理论作为双杂化密度泛函理论的一个组成部分,被广泛应用于分子大小的五阶标度。然而,众所周知,MP2对于大型分子间相互作用的精度有限,而且MP2的能量不受下限限制。正则化MP2方法旨在解决这些问题,而不改变正式的五阶缩放,因此作为更准确和健壮的替代方案而受到关注。在这项工作中,我们报告了一种具有共享和分布式内存并行实现的线性缩放算法,用于评估两种正则化MP2方法:κ-MP2和大小一致的二阶Brillouin-Wigner摄动理论(BW-s2)。该算法使用单个数值阈值来控制精度,事实证明,阈值每减少10个因素,数值误差就会减少大约10倍。对于包括线性烷烃和三维复合物在内的一系列系统,时间到溶液的缩放被评估为分子大小(最多1800个原子和25000个原子轨道)、阈值的选择和处理器数量(最多2000个核心)的函数。结果显示BW-s2比MP2或κ-MP2更早地与规范实现交叉。新的实现用于评估κ-MP2和BW-s2方法在一些最大的分子间相互作用测试集(包括IONPI19, L7, S12L和C60ISO)中的准确性,这些测试集具有耦合簇基准数据。结果表明,κ-MP2和BW-s2的性能远优于MP2。据报道,在短距离氨基酸相互作用的情况下,对κ-MP2和BW-s2进行了额外的测试,其中MP2表现得非常好。
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来源期刊
Journal of Chemical Theory and Computation
Journal of Chemical Theory and Computation 化学-物理:原子、分子和化学物理
CiteScore
9.90
自引率
16.40%
发文量
568
审稿时长
1 months
期刊介绍: The Journal of Chemical Theory and Computation invites new and original contributions with the understanding that, if accepted, they will not be published elsewhere. Papers reporting new theories, methodology, and/or important applications in quantum electronic structure, molecular dynamics, and statistical mechanics are appropriate for submission to this Journal. Specific topics include advances in or applications of ab initio quantum mechanics, density functional theory, design and properties of new materials, surface science, Monte Carlo simulations, solvation models, QM/MM calculations, biomolecular structure prediction, and molecular dynamics in the broadest sense including gas-phase dynamics, ab initio dynamics, biomolecular dynamics, and protein folding. The Journal does not consider papers that are straightforward applications of known methods including DFT and molecular dynamics. The Journal favors submissions that include advances in theory or methodology with applications to compelling problems.
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