Genome characterisation of the first isolate of human enterovirus c99 from an acute flaccid paralysis case in Brazil.

IF 2.5 4区 医学 Q2 PARASITOLOGY
Memorias do Instituto Oswaldo Cruz Pub Date : 2025-06-27 eCollection Date: 2025-01-01 DOI:10.1590/0074-02760240230
Jéssica Tatiane Sauthier, Jéssica Barreto Dias, Cristiane de Sousa Ferreira, Brendo de Oliveira Nascimento Gomes, Ketlyn Araujo Fraga, Elisa Cavalcante Pereira, Bruna Mendonça da Silva, Letícia Ferreira Lima, Irving Martins da Silveira Gonçalves, Audrien Alves Andrade de Souza, Marília Alves Figueira de Melo, Alexandre Araujo Cunha Dos Santos, Beatriz de Lima Alessio Müller, Aline Dos Santos Moreira, Paola Cristina Resende, Eduardo de Mello Volotão, Edson Elias da Silva
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引用次数: 0

Abstract

Background: Human enterovirus C99 (HEV-C99) is a member of the species Enterovirus C. Currently, three complete genomes of HEV-C99 were reported in Brazil, all obtained from children with gastroenteritis symptoms. Notwithstanding, no HEV-C99 complete genome associated with AFP cases in Brazil have been analysed so far.

Objectives: In light of this, molecular characterisation of an HEV-C99 isolated from a case of acute flaccid paralysis (AFP) in Brazil was carried out.

Methods: In 2005, an HEV-C99 strain was isolated from a 2-year-old female child in Santa Catarina State, Brazil, showing classic symptoms of AFP. Stool sample was inoculated into specific cell cultures. Viral RNA was extracted, and polymerase chain reaction (PCR) were performed to amplify the VP1 gene; the sequence was analysed for molecular identification. Subsequently, the complete genome was sequenced and analysed, including a phylogenetic analysis of the VP1 gene.

Findings: The isolate, denominated HEV-C99/33322/BRA/2005 presented 85.85% identity to other HEV-C99 strains also described in Brazil, subsequently. Besides, the isolate grouped together with HEV-C99 cluster C strains. To our knowledge, this was the first described HEV-C99 isolated from an AFP case in Brazil.

Main conclusions: The data generated in this study bolster the role of HEV-C99 as an etiologic agent of AFP. Furthermore, this research enhances our knowledge regarding the HEV-C99 genetic diversity.

巴西急性弛缓性麻痹病例中首次分离的人肠病毒c99的基因组特征。
背景:人肠病毒C99 (HEV-C99)是肠病毒c的一种。目前,在巴西报告了三个完整的HEV-C99基因组,均来自有胃肠炎症状的儿童。尽管如此,迄今为止尚未对巴西与AFP病例相关的HEV-C99全基因组进行分析。目的:鉴于此,从巴西急性弛缓性麻痹(AFP)病例中分离的HEV-C99的分子特征进行了研究。方法:2005年,从巴西圣卡塔琳娜州一名2岁女童身上分离出一株HEV-C99毒株,该女童表现出AFP的典型症状。将粪便样本接种到特定的细胞培养物中。提取病毒RNA,采用聚合酶链反应(PCR)扩增VP1基因;对该序列进行了分子鉴定。随后,对全基因组进行测序和分析,包括VP1基因的系统发育分析。结果:分离株HEV-C99/33322/BRA/2005与巴西其他HEV-C99株同源性为85.85%。此外,该分离株与HEV-C99簇C型毒株归为一类。据我们所知,这是巴西首次从AFP病例中分离到HEV-C99病毒。主要结论:本研究产生的数据支持HEV-C99作为AFP病因的作用。此外,本研究增加了我们对HEV-C99遗传多样性的认识。
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来源期刊
CiteScore
5.00
自引率
3.60%
发文量
91
审稿时长
3-8 weeks
期刊介绍: Memórias do Instituto Oswaldo Cruz is a journal specialized in microbes & their vectors causing human infections. This means that we accept manuscripts covering multidisciplinary approaches and findings in the basic aspects of infectious diseases, e.g. basic in research in prokariotes, eukaryotes, and/or virus. Articles must clearly show what is the main question to be answered, the hypothesis raised, and the contribution given by the study. Priority is given to manuscripts reporting novel mechanisms and general findings concerning the biology of human infectious prokariotes, eukariotes or virus. Papers reporting innovative methods for diagnostics or that advance the basic research with these infectious agents are also welcome. It is important to mention what we do not publish: veterinary infectious agents research, taxonomic analysis and re-description of species, epidemiological studies or surveys or case reports and data re-analysis. Manuscripts that fall in these cases or that are considered of low priority by the journal editorial board, will be returned to the author(s) for submission to another journal.
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