A splice donor variant in SLAMF1 is associated with canine atopic dermatitis.

IF 2.6 2区 农林科学 Q1 VETERINARY SCIENCES
Frontiers in Veterinary Science Pub Date : 2025-06-19 eCollection Date: 2025-01-01 DOI:10.3389/fvets.2025.1550617
Oliver P Forman, Jamie Freyer, Abigail Kerr, Julia D Labadie, Michael Denyer, Debbie J Gow, Janet Alexander, Michelle Daya, Yaindrys Rodriguez Olivera, Cecilia Lozoya, Christian Leutenegger, Christian Savard, Jason T Huff, Rebecca Chodroff Foran
{"title":"A splice donor variant in <i>SLAMF1</i> is associated with canine atopic dermatitis.","authors":"Oliver P Forman, Jamie Freyer, Abigail Kerr, Julia D Labadie, Michael Denyer, Debbie J Gow, Janet Alexander, Michelle Daya, Yaindrys Rodriguez Olivera, Cecilia Lozoya, Christian Leutenegger, Christian Savard, Jason T Huff, Rebecca Chodroff Foran","doi":"10.3389/fvets.2025.1550617","DOIUrl":null,"url":null,"abstract":"<p><strong>Introduction: </strong>Canine atopic dermatitis (CAD) is a common inflammatory skin condition in dogs. It is a lifelong issue that poses a significant welfare concern due to the chronic skin discomfort and pruritus (itching) experienced by affected animals. Excessive scratching, licking, and chewing cause self-inflicted injuries to the skin and increase the risk of secondary infections. Several dog breeds, including Labrador Retriever, Boxer, and French Bulldog, are known to be predisposed to these issues, suggesting a genetic link to the condition.</p><p><strong>Methods: </strong>Access to a large population of dogs genotyped on a medium-density single-nucleotide polymorphism (SNP) array through commercial Wisdom Panel testing, along with their linked clinical records, allowed a large-scale, highly powered genome-wide association study (GWAS) to be performed. In this study, over 28,000 dogs were examined to identify genetic changes associated with CAD.</p><p><strong>Results: </strong>A statistically significant signal on canine chromosome 38 was identified, with a particularly strong signal in French Bulldogs. Whole-genome resequencing revealed a compelling splice donor variant in the signaling lymphocytic activation molecule 1 (<i>SLAMF1</i>), a transmembrane receptor with important functions in immune cells. Further analysis of additional genome sequences and RNA samples from the MARS PETCARE BIOBANK confirmed that the <i>SLAMF1</i> splice variant is a strong potential contributor to an increased risk of atopic dermatitis.</p><p><strong>Discussion: </strong>The discovery represents the first compelling genetic variant associated with CAD to be validated in more than one breed of dog. The study identifies <i>SLAMF1</i> as a potential pharmaceutical target and the associated variant as a biomarker to enable dog breeders to make informed breeding decisions to reduce risk of CAD in future generations. The presence of the <i>SLAMF1</i> variant in many dog breeds and free-roaming dogs worldwide, indicates its potential role in contributing to the global risk of CAD.</p>","PeriodicalId":12772,"journal":{"name":"Frontiers in Veterinary Science","volume":"12 ","pages":"1550617"},"PeriodicalIF":2.6000,"publicationDate":"2025-06-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12221898/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Veterinary Science","FirstCategoryId":"97","ListUrlMain":"https://doi.org/10.3389/fvets.2025.1550617","RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"VETERINARY SCIENCES","Score":null,"Total":0}
引用次数: 0

Abstract

Introduction: Canine atopic dermatitis (CAD) is a common inflammatory skin condition in dogs. It is a lifelong issue that poses a significant welfare concern due to the chronic skin discomfort and pruritus (itching) experienced by affected animals. Excessive scratching, licking, and chewing cause self-inflicted injuries to the skin and increase the risk of secondary infections. Several dog breeds, including Labrador Retriever, Boxer, and French Bulldog, are known to be predisposed to these issues, suggesting a genetic link to the condition.

Methods: Access to a large population of dogs genotyped on a medium-density single-nucleotide polymorphism (SNP) array through commercial Wisdom Panel testing, along with their linked clinical records, allowed a large-scale, highly powered genome-wide association study (GWAS) to be performed. In this study, over 28,000 dogs were examined to identify genetic changes associated with CAD.

Results: A statistically significant signal on canine chromosome 38 was identified, with a particularly strong signal in French Bulldogs. Whole-genome resequencing revealed a compelling splice donor variant in the signaling lymphocytic activation molecule 1 (SLAMF1), a transmembrane receptor with important functions in immune cells. Further analysis of additional genome sequences and RNA samples from the MARS PETCARE BIOBANK confirmed that the SLAMF1 splice variant is a strong potential contributor to an increased risk of atopic dermatitis.

Discussion: The discovery represents the first compelling genetic variant associated with CAD to be validated in more than one breed of dog. The study identifies SLAMF1 as a potential pharmaceutical target and the associated variant as a biomarker to enable dog breeders to make informed breeding decisions to reduce risk of CAD in future generations. The presence of the SLAMF1 variant in many dog breeds and free-roaming dogs worldwide, indicates its potential role in contributing to the global risk of CAD.

SLAMF1剪接供体变异与犬特应性皮炎有关。
犬特应性皮炎(CAD)是犬类常见的皮肤炎症。这是一个终生的问题,由于受感染动物的慢性皮肤不适和瘙痒(瘙痒),它引起了重大的福利关注。过度的抓、舔和咀嚼会对皮肤造成自我伤害,并增加继发感染的风险。几个品种的狗,包括拉布拉多寻回犬、拳师犬和法国斗牛犬,都有这些问题的倾向,这表明遗传与这种情况有关。方法:通过商业智慧小组测试,利用中密度单核苷酸多态性(SNP)阵列对大量狗进行基因分型,并结合它们的相关临床记录,进行大规模、高强度的全基因组关联研究(GWAS)。在这项研究中,超过28,000只狗接受了检查,以确定与CAD相关的基因变化。结果:在犬的38号染色体上发现了具有统计学意义的信号,其中法国斗牛犬的信号特别强。全基因组重测序揭示了信号淋巴细胞激活分子1 (SLAMF1)的剪接供体变异,这是一种在免疫细胞中具有重要功能的跨膜受体。对来自MARS PETCARE BIOBANK的额外基因组序列和RNA样本的进一步分析证实,SLAMF1剪接变体是导致特应性皮炎风险增加的强大潜在因素。讨论:这一发现代表了第一个令人信服的与CAD相关的基因变异,在不止一个品种的狗身上得到了验证。该研究将SLAMF1确定为潜在的药物靶点,并将相关变体确定为生物标志物,使犬育种者能够做出明智的育种决策,以降低后代患CAD的风险。SLAMF1变异存在于全球许多犬种和自由漫游犬中,表明其在全球CAD风险中的潜在作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Frontiers in Veterinary Science
Frontiers in Veterinary Science Veterinary-General Veterinary
CiteScore
4.80
自引率
9.40%
发文量
1870
审稿时长
14 weeks
期刊介绍: Frontiers in Veterinary Science is a global, peer-reviewed, Open Access journal that bridges animal and human health, brings a comparative approach to medical and surgical challenges, and advances innovative biotechnology and therapy. Veterinary research today is interdisciplinary, collaborative, and socially relevant, transforming how we understand and investigate animal health and disease. Fundamental research in emerging infectious diseases, predictive genomics, stem cell therapy, and translational modelling is grounded within the integrative social context of public and environmental health, wildlife conservation, novel biomarkers, societal well-being, and cutting-edge clinical practice and specialization. Frontiers in Veterinary Science brings a 21st-century approach—networked, collaborative, and Open Access—to communicate this progress and innovation to both the specialist and to the wider audience of readers in the field. Frontiers in Veterinary Science publishes articles on outstanding discoveries across a wide spectrum of translational, foundational, and clinical research. The journal''s mission is to bring all relevant veterinary sciences together on a single platform with the goal of improving animal and human health.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信