SARS-CoV-2 antibody immunity across three continents: the West Africa, West Indies, West London Consortium.

David Greenwood, Oliver Hague, Eliza Mari Kwesi-Maliepaard, Shanice A Redman, Flora Scott, Joshua J Anzinger, Gordon Awandare, David Lv Bauer, Yaw Bediako, Edward J Carr, Christine Vf Carrington, Adam Kucharski, Peter Quashie, Emma C Wall, Mary Y Wu
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Abstract

Background: The experience of the COVID-19 pandemic has differed across continents. We hypothesized that regional differences in SARS-CoV-2 immunity might explain this observation. We therefore established the WWW Consortium in Ghana, W Africa; Jamaica, W Indies; and W London. Here, we describe the extent to which antibody immunity differs between these geographic locations.

Methods: The WWW Consortium harmonises across the HERITAGE (Accra, Ghana), WINDFall (Kingston, Jamaica) and Legacy (London, UK) studies, establishing sharing frameworks for samples, metadata, and data; related permissions and oversight; and associated physical and cloud infrastructure. With centralised testing, we performed serological assessments across all three locations at two snapshots in 2024 (April 1st - August 18th; August 19th - December 31st) using high-throughput live virus neutralization and anti-nucleocapsid IgG, including n=763 individuals.

Findings: We found that across all sites most participants had detectable neutralising antibody titres against JN.1 and XEC - the predominant variants in 2024. There were site-related differences in immunity: vaccine-included SARS-CoV-2 strains were better neutralised by participants from the Legacy study - Ancestral, BA.5, XBB.1.5 initially, and JN.1 after a homologous booster in autumn 2024. For HERITAGE, neutralisation of both alpha- (HCoV-229E) and beta-coronaviruses (HCoV-OC43) was higher than WINDFall suggesting a cross-coronavirus serological response in West Africa. Finally, antigenic cartography identified two distinct antibody landscapes, with JN.1 and XEC antigenically distant in Legacy, but not in HERITAGE and WINDFall.

Interpretation: There is international heterogeneity in SARS-CoV-2 antibody immunity. Global recommendations for vaccine strain selection should incorporate data from diverse populations to ensure accurate, equitable recommendations.

Funding: The Wellcome Trust.

SARS-CoV-2抗体免疫跨越三大洲:西非、西印度群岛、西伦敦联盟。
背景:各大洲对COVID-19大流行的经历各不相同。我们假设SARS-CoV-2免疫的区域差异可以解释这一观察结果。因此,我们在西非的加纳建立了WWW联盟;牙买加、西印度群岛;和伦敦西部。在这里,我们描述了这些地理位置之间抗体免疫差异的程度。方法:WWW联盟协调HERITAGE(加纳阿克拉)、横财(牙买加金斯顿)和遗产(英国伦敦)的研究,建立样本、元数据和数据的共享框架;相关权限和监督;以及相关的物理和云基础设施。通过集中检测,我们在2024年(4月1日至8月18日;8月19日- 12月31日)使用高通量活病毒中和和抗核衣壳IgG,共包括n=763例个体。研究结果:我们发现,在所有位点,大多数参与者都有可检测到的针对JN.1和XEC的中和抗体效价,这是2024年的主要变异。免疫存在位点相关差异:遗留研究的参与者对包含疫苗的SARS-CoV-2毒株(最初为祖传、BA.5、XBB.1.5, 2024年秋季接种同源增强剂后为jon .1)有更好的中和效果。对于HERITAGE, α - (HCoV-229E)和β -冠状病毒(HCoV-OC43)的中和率均高于横断,表明西非出现了跨冠状病毒血清学反应。最后,抗原制图确定了两个不同的抗体图谱,在Legacy中,JN.1和XEC抗原距离较远,而在HERITAGE和横财中则没有。结论:国际间SARS-CoV-2抗体免疫存在异质性。关于疫苗株选择的全球建议应纳入来自不同人群的数据,以确保准确、公平的建议。资助:惠康信托基金。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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