Evaluation of Six Commercial and Noncommercial Colistin Resistance Diagnostics

IF 3.9 3区 生物学 Q2 MICROBIOLOGY
Tumisho Mmatumelo Seipei Leshaba, Masego Mmatli, Nontombi Marylucy Mbelle, John Osei Sekyere
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引用次数: 0

Abstract

Resistance to colistin, a last-reserve antibiotic used for treating drug-resistant infections, is rising globally. We compared six commercial and in-house diagnostics—ComASP colistin, CHROMagar COL-APSE, rapid polymyxin NP (Nordmann/Poirel) test, Sensititre, MicroScan, and Vitek 2—against ISO-standard broth microdilution (BMD) using 142 Gram-negative isolates. The isolates (Enterobacterales = 110, Acinetobacter baumannii = 21, Pseudomonas aeruginosa = 11) underwent BMD and conventional multiplex PCR screening for mcr-1mcr-5. Sensitivity, specificity, categorical agreement (CA), major error (ME), and very major error (VME) were calculated for each test. Vitek 2 and sensititre yielded the highest CA (≥ 98%) and the lowest VME (≤ 0.0%) across taxa. ComASP showed excellent performance for A. baumannii (100% sensitivity/specificity) but slightly lower CA for P. aeruginosa (73%). CHROMagar COL-APSE demonstrated acceptable sensitivity (92%) but low specificity (69%) in Enterobacterales. MicroScan had reduced specificity in Enterobacterales (87.80%). The CHROMAgar COL-APSE efficiently identified the species with their unique colours but was the least specific (68.63%), with the highest ME in Enterobacterales. The rapid NP test provided rapid results within 4 h but showed a relatively high VME (7.84%), despite maintaining an acceptable sensitivity (92.16%) and specificity (96.08%). For laboratories with automated platforms, Vitek 2 remains optimal for colistin MIC testing; Sensititre and ComASP are suitable low-cost BMD alternatives. The Rapid NP test provides a same-day screen, but confirmatory MIC testing is advised. CHROMagar COL-APSE should be used with a ≤ 1 CFU mL⁻¹ inoculum to minimise false resistance calls. Knowing the comparative performance of these different tests will assist in choosing the best test for every species, improving on efficient diagnosis and healthcare outcomes.

Abstract Image

6种商业和非商业粘菌素耐药诊断方法的评价
粘菌素是一种用于治疗耐药感染的最后储备抗生素,全球对粘菌素的耐药性正在上升。我们使用142株革兰氏阴性分离株,比较了6种商用和内部诊断方法——comasp粘菌素、CHROMagar colp - apse、快速多粘菌素NP (Nordmann/Poirel)试验、Sensititre、MicroScan和Vitek 2与iso标准肉汤微量稀释(BMD)的差异。对分离物(肠杆菌110株,鲍曼不动杆菌21株,铜绿假单胞菌11株)进行BMD和常规多重PCR筛选mcr-1-mcr-5。计算每个试验的敏感性、特异性、绝对一致性(CA)、主要误差(ME)和非常主要误差(VME)。Vitek 2和sensitivity在整个分类群中获得最高的CA(≥98%)和最低的VME(≤0.0%)。ComASP对鲍曼假单胞菌(A. baumannii)具有良好的检测效果(100%),但对铜绿假单胞菌(P. aeruginosa)的检测CA略低(73%)。CHROMagar COL-APSE在肠杆菌中具有可接受的灵敏度(92%),但特异性较低(69%)。MicroScan在肠杆菌中的特异性降低(87.80%)。CHROMAgar colp - apse可以有效地识别出具有独特颜色的物种,但特异性最低(68.63%),在肠杆菌中ME最高。快速NP测试在4小时内提供快速结果,但显示相对较高的VME(7.84%),尽管保持了可接受的灵敏度(92.16%)和特异性(96.08%)。对于自动化平台的实验室,Vitek 2仍然是粘菌素MIC测试的最佳选择;Sensititre和ComASP是合适的低成本BMD替代品。快速NP测试提供当日筛查,但建议进行确认性MIC测试。CHROMagar colap - apse应与≤1 CFU mL的接种量一起使用,以尽量减少错误的耐药性呼叫。了解这些不同测试的比较性能将有助于为每个物种选择最佳测试,提高有效诊断和医疗保健结果。
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来源期刊
MicrobiologyOpen
MicrobiologyOpen MICROBIOLOGY-
CiteScore
8.00
自引率
0.00%
发文量
78
审稿时长
20 weeks
期刊介绍: MicrobiologyOpen is a peer reviewed, fully open access, broad-scope, and interdisciplinary journal delivering rapid decisions and fast publication of microbial science, a field which is undergoing a profound and exciting evolution in this post-genomic era. The journal aims to serve the research community by providing a vehicle for authors wishing to publish quality research in both fundamental and applied microbiology. Our goal is to publish articles that stimulate discussion and debate, as well as add to our knowledge base and further the understanding of microbial interactions and microbial processes. MicrobiologyOpen gives prompt and equal consideration to articles reporting theoretical, experimental, applied, and descriptive work in all aspects of bacteriology, virology, mycology and protistology, including, but not limited to: - agriculture - antimicrobial resistance - astrobiology - biochemistry - biotechnology - cell and molecular biology - clinical microbiology - computational, systems, and synthetic microbiology - environmental science - evolutionary biology, ecology, and systematics - food science and technology - genetics and genomics - geobiology and earth science - host-microbe interactions - infectious diseases - natural products discovery - pharmaceutical and medicinal chemistry - physiology - plant pathology - veterinary microbiology We will consider submissions across unicellular and cell-cluster organisms: prokaryotes (bacteria, archaea) and eukaryotes (fungi, protists, microalgae, lichens), as well as viruses and prions infecting or interacting with microorganisms, plants and animals, including genetic, biochemical, biophysical, bioinformatic and structural analyses. The journal features Original Articles (including full Research articles, Method articles, and Short Communications), Commentaries, Reviews, and Editorials. Original papers must report well-conducted research with conclusions supported by the data presented in the article. We also support confirmatory research and aim to work with authors to meet reviewer expectations. MicrobiologyOpen publishes articles submitted directly to the journal and those referred from other Wiley journals.
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