Discovery and characterization of high-activity formate oxidase with low Km value under non-acidic conditions.

IF 1.4 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Zhenyu Zhai, Yi-Heng P Job Zhang
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引用次数: 0

Abstract

Formate oxidase (FOX) has applications in enzymatic assays, pollutant biodegradation, and bioorganic chemistry. However, its sources are few and none of them have significant activity above pH 7. We performed bioinformatic mining of FOX and identified 579 potential sequences. Two FOXs from Aspergillus nomiae (AnFOX) and Trichophyton rubrum (TrFOX) were expressed in E. coli. AnFOX had an alkalinity-tolerant pH activity range. It not only had a Km value for formate one order of magnitude lower, but also had far higher catalytic activity under non-acidic conditions. Spectroscopic and mass spectrometry analyses found that AnFOX contains an 8-formyl FAD cofactor. AnFOX enabled the H2O2-dependent sulfoxidation of thioanisole over pH 6-8. Structural analysis and kinetic studies revealed that the acidic residue E142, positioned on the surface adjacent to the isoalloxazine ring of flavin, could contribute to the unique pH preference. This novel FOX could greatly expand the applicability under non-acidic conditions.

非酸性条件下低Km值高活性甲酸氧化酶的发现与表征。
甲酸氧化酶(FOX)在酶分析、污染物生物降解和生物有机化学中有广泛的应用。然而,它的来源很少,没有一个在pH 7以上有显著的活性。我们对FOX进行了生物信息学挖掘,并确定了579个潜在序列。在大肠杆菌中分别表达了两种fox,分别为名曲霉(Aspergillus nomiae, AnFOX)和红毛霉(Trichophyton rubrum, TrFOX)。AnFOX具有一定的耐碱性pH活性范围。它不仅对甲酸酯的Km值低一个数量级,而且在非酸性条件下具有更高的催化活性。光谱和质谱分析发现AnFOX含有8-甲酰基FAD辅因子。AnFOX使硫代苯甲醚在pH 6-8范围内的h2o2依赖性亚砜化。结构分析和动力学研究表明,位于黄素异alloxazine环附近的酸性残留物E142可能是其独特的pH偏好的原因之一。这种新型FOX在非酸性条件下的适用性大大扩大。
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来源期刊
Bioscience, Biotechnology, and Biochemistry
Bioscience, Biotechnology, and Biochemistry 生物-生化与分子生物学
CiteScore
3.50
自引率
0.00%
发文量
183
审稿时长
1 months
期刊介绍: Bioscience, Biotechnology, and Biochemistry publishes high-quality papers providing chemical and biological analyses of vital phenomena exhibited by animals, plants, and microorganisms, the chemical structures and functions of their products, and related matters. The Journal plays a major role in communicating to a global audience outstanding basic and applied research in all fields subsumed by the Japan Society for Bioscience, Biotechnology, and Agrochemistry (JSBBA).
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