Rational optimization of D3R/GSK-3β dual target-directed ligands as potential treatment for bipolar disorder: Design, synthesis, X-ray crystallography, molecular dynamics simulations, in vitro ADME, and in vivo pharmacokinetic studies
R.M.C. Di Martino , D. Russo , I. Penna , S. Demuro , A. Dalle Vedove , R. Spagnuolo , G. Ottonello , S.M. Bertozzi , M. Summa , J. Desantis , A. Valeri , L. Pruccoli , S.K. Tripathi , A. Tarozzi , P. Storici , S. Girotto , R. Bertorelli , A. Armirotti , G. Cruciani , T. Bandiera , G. Bottegoni
{"title":"Rational optimization of D3R/GSK-3β dual target-directed ligands as potential treatment for bipolar disorder: Design, synthesis, X-ray crystallography, molecular dynamics simulations, in vitro ADME, and in vivo pharmacokinetic studies","authors":"R.M.C. Di Martino , D. Russo , I. Penna , S. Demuro , A. Dalle Vedove , R. Spagnuolo , G. Ottonello , S.M. Bertozzi , M. Summa , J. Desantis , A. Valeri , L. Pruccoli , S.K. Tripathi , A. Tarozzi , P. Storici , S. Girotto , R. Bertorelli , A. Armirotti , G. Cruciani , T. Bandiera , G. Bottegoni","doi":"10.1016/j.ejmech.2025.117899","DOIUrl":null,"url":null,"abstract":"<div><div>Bipolar disorder is a complex neuropsychiatric condition with a significant unmet medical need, as current treatments lack disease-modifying properties and multimodal therapeutic effects. To overcome the limitations of single-target drugs, we designed dual-target ligands that combine partial agonism at the dopamine D3 receptor (D3R) with inhibition of glycogen synthase kinase-3β (GSK-3β). We previously identified ARN24161 (<strong>1</strong>) as a promising prototype, demonstrating partial agonism at D3R (EC<sub>50</sub> = 10.1 nM, % Eff. = 26.3) and GSK-3β inhibition (IC<sub>50</sub> = 561 nM). However, its drug-like properties remained suboptimal. To optimize this compound, we initiated a multidisciplinary refinement campaign, leveraging computational modeling and crystallographic data to fine-tune the balance between D3R and GSK-3β activity, reduce P-glycoprotein (P-gp) affinity, and improve the pharmacokinetic profile. This effort led to the identification of ARN25297 (<strong>5</strong>), a moderately balanced dual-target ligand that exhibits partial agonism at D3R (EC<sub>50</sub> = 13.1 nM, % Eff. = 17.1) and potent GSK-3β inhibition (IC<sub>50</sub> = 47.0 nM). Notably, ARN25657 (<strong>16</strong>) emerged as the most well-balanced candidate, demonstrating enhanced D3R partial agonism (EC<sub>50</sub> = 15.2 nM, % Eff. = 37.7) alongside strong GSK-3β inhibition (IC<sub>50</sub> = 19.3 nM). Compound <strong>16</strong> also exhibited the lowest P-gp inhibition and significant improvements in <em>in vitro</em> ADME properties compared to prototype <strong>1</strong>, while maintaining a balanced dual target profile. Although the PK profile of <strong>16</strong> remained comparable to that of prototype <strong>1</strong>, these findings lay the groundwork for further lead optimization and structural refinement, driving future <em>in vivo</em> proof-of-concept toward innovative therapeutic strategies for bipolar disorder and related neuropsychiatric conditions.</div></div>","PeriodicalId":314,"journal":{"name":"European Journal of Medicinal Chemistry","volume":"297 ","pages":"Article 117899"},"PeriodicalIF":6.0000,"publicationDate":"2025-06-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"European Journal of Medicinal Chemistry","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0223523425006646","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MEDICINAL","Score":null,"Total":0}
引用次数: 0
Abstract
Bipolar disorder is a complex neuropsychiatric condition with a significant unmet medical need, as current treatments lack disease-modifying properties and multimodal therapeutic effects. To overcome the limitations of single-target drugs, we designed dual-target ligands that combine partial agonism at the dopamine D3 receptor (D3R) with inhibition of glycogen synthase kinase-3β (GSK-3β). We previously identified ARN24161 (1) as a promising prototype, demonstrating partial agonism at D3R (EC50 = 10.1 nM, % Eff. = 26.3) and GSK-3β inhibition (IC50 = 561 nM). However, its drug-like properties remained suboptimal. To optimize this compound, we initiated a multidisciplinary refinement campaign, leveraging computational modeling and crystallographic data to fine-tune the balance between D3R and GSK-3β activity, reduce P-glycoprotein (P-gp) affinity, and improve the pharmacokinetic profile. This effort led to the identification of ARN25297 (5), a moderately balanced dual-target ligand that exhibits partial agonism at D3R (EC50 = 13.1 nM, % Eff. = 17.1) and potent GSK-3β inhibition (IC50 = 47.0 nM). Notably, ARN25657 (16) emerged as the most well-balanced candidate, demonstrating enhanced D3R partial agonism (EC50 = 15.2 nM, % Eff. = 37.7) alongside strong GSK-3β inhibition (IC50 = 19.3 nM). Compound 16 also exhibited the lowest P-gp inhibition and significant improvements in in vitro ADME properties compared to prototype 1, while maintaining a balanced dual target profile. Although the PK profile of 16 remained comparable to that of prototype 1, these findings lay the groundwork for further lead optimization and structural refinement, driving future in vivo proof-of-concept toward innovative therapeutic strategies for bipolar disorder and related neuropsychiatric conditions.
期刊介绍:
The European Journal of Medicinal Chemistry is a global journal that publishes studies on all aspects of medicinal chemistry. It provides a medium for publication of original papers and also welcomes critical review papers.
A typical paper would report on the organic synthesis, characterization and pharmacological evaluation of compounds. Other topics of interest are drug design, QSAR, molecular modeling, drug-receptor interactions, molecular aspects of drug metabolism, prodrug synthesis and drug targeting. The journal expects manuscripts to present the rational for a study, provide insight into the design of compounds or understanding of mechanism, or clarify the targets.