New Application of Histological Staining for Visualization of Endogenous Proteins in Fossil Material.

IF 3.6 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Journal of Proteome Research Pub Date : 2025-07-04 Epub Date: 2025-06-25 DOI:10.1021/acs.jproteome.5c00078
Hayato Inaba, Kentaro Chiba, Mototaka Saneyoshi, Takaaki Miyaji, Asako Kawakami, Noriyuki Nagaoka, Yasushi Takechi, Kiyofumi Takabatake, Kirstin S Brink, Miu Tanaka, Masaki Eda, Yoshitsugu Kobayashi, Hidetsugu Tsujigiwa
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引用次数: 0

Abstract

Biochemical applications are increasingly utilized in paleontological studies, especially for detecting ancient proteins in fossil samples. Histopathological staining techniques have been applied, but they have yet to specifically target type I collagen, the primary bone matrix protein and the most significant protein of interest in paleoproteomic research. Moreover, these staining methods are often applied to demineralized fossils, which remove the original microstructure of the bone matrix and increase the risk of contamination. To address these limitations, this study aimed to test the effectiveness of special staining methods for detecting collagen using Pleistocene-aged fossil specimens. Trials on demineralized and nondemineralized modern bone samples, as well as nondemineralized fossil samples, demonstrated Van Gieson's staining method as the most suitable for visualizing collagen distribution in hard tissue matrices. Colorimetric analysis, electrophoresis, and subsequent mass spectrometry of extracts further confirmed the endogenous nature of the collagen in the fossil samples. Future studies may benefit from employing Van Gieson's staining on nondemineralized bone samples to detect collagen in fossils, advancing our understanding of ancient protein preservation.

组织学染色在化石材料内源蛋白可视化中的新应用。
生物化学应用越来越多地应用于古生物学研究,特别是用于检测化石样品中的古代蛋白质。已经应用了组织病理学染色技术,但它们尚未专门针对I型胶原蛋白,这是主要的骨基质蛋白,也是古蛋白质组学研究中最重要的蛋白质。此外,这些染色方法通常用于脱矿化石,这会去除骨基质的原始微观结构,增加污染的风险。为了解决这些局限性,本研究旨在测试使用更新世化石标本检测胶原蛋白的特殊染色方法的有效性。对脱矿和非脱矿的现代骨样本以及非脱矿的化石样本的试验表明,Van Gieson的染色方法最适合于可视化硬组织基质中的胶原分布。比色分析、电泳和随后的质谱分析进一步证实了化石样品中胶原蛋白的内源性性质。未来的研究可能会受益于Van Gieson对非脱矿骨样本的染色来检测化石中的胶原蛋白,从而提高我们对古代蛋白质保存的理解。
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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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