Simultaneous Taxonomic and Sex Identification of Bos and Bison Teeth Using Low-Invasive High-Resolution Mass Spectrometry.

IF 3.8 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Fabrice Bray, Marie-Anne Julien, Louis Delegue, Stéphanie Flament, Hélène Touzet, Patrick Auguste, Tarek Oueslati, Jessica Cohen, Emmanuel Desclaux
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引用次数: 0

Abstract

Differentiating between the genera Bos and Bison from fossil bones and teeth can be difficult and even impossible due to taphonomic deterioration, which can also muddle the identification of the sex of the animal. Both are key issues for paleobiological and paleoecological studies, as the two species are generally considered having quite similar spatial distributions but distinct ecological preferences and likely similar social behaviors with males separated from female groups during most of the year. However, identifications are usually limited to "Bos/Bison" and "Sex indeterminate", which severely limits interpretations. Here, we propose minimally invasive methods with mass spectrometry for the simultaneous taxonomic and sex distinction of Bos and Bison teeth, with application on Middle Pleistocene large bovid teeth from the Lazaret cave. The results obtained show that enamelin, COL1A3, and α-2-glycoprotein allow for taxonomic differentiation between Bos and Bison, while AMELX/Y sequences of the same samples allow for sex identification. Both were successfully performed on the 160-120 ky archeological teeth, without affecting the specimen. This study highlights the potential of proteomics for simultaneous taxonomic and sex determination for other modern or fossil samples, including rare or precious materials, using low-invasive high-resolution mass spectrometry. It opens up unprecedented avenues for paleobiological studies as well as cultural and natural heritage and will widely participate to strengthen our knowledge of past animal and human communities.

利用低侵入性高分辨率质谱法同时对Bos和野牛牙齿进行分类和性别鉴定。
从化石骨骼和牙齿中区分野牛属和野牛属是很困难的,甚至是不可能的,因为分类学的恶化,这也会混淆动物性别的识别。两者都是古生物学和古生态学研究的关键问题,因为这两个物种通常被认为具有非常相似的空间分布,但不同的生态偏好和可能相似的社会行为,在一年中的大部分时间里,雄性与雌性群体分开。然而,识别通常仅限于“野牛/野牛”和“性别不确定”,这严重限制了解释。在此,我们提出了一种微创质谱方法,用于同时进行Bos和Bison牙齿的分类和性别区分,并应用于Lazaret洞穴的中更新世大型牛类牙齿。结果表明,釉质蛋白、COL1A3和α-2-糖蛋白序列可以区分野牛和博斯牛,而相同样品的AMELX/Y序列可以区分野牛和博斯牛。这两种方法都成功地在160-120公斤的考古牙齿上进行了试验,而没有影响标本。这项研究强调了蛋白质组学在其他现代或化石样本(包括稀有或珍贵材料)的同时分类和性别测定方面的潜力,使用低侵入性高分辨率质谱法。它为古生物学研究以及文化和自然遗产开辟了前所未有的途径,并将广泛参与加强我们对过去动物和人类社区的了解。
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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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