Development of a plasmid reference material to improve the accuracy of quantitative detection of Bovine parvovirus†

IF 2.6 3区 化学 Q2 CHEMISTRY, ANALYTICAL
Caihang Zhang, Mengke Lv, Yanmin Lin, Jiayi Yang, Yu Zhang, Xia Wang, Jingya Yang and Lianhua Dong
{"title":"Development of a plasmid reference material to improve the accuracy of quantitative detection of Bovine parvovirus†","authors":"Caihang Zhang, Mengke Lv, Yanmin Lin, Jiayi Yang, Yu Zhang, Xia Wang, Jingya Yang and Lianhua Dong","doi":"10.1039/D5AY00491H","DOIUrl":null,"url":null,"abstract":"<p >Reference materials (RMs) serve as essential standards for the quantitative analysis of nucleic acid molecules using quantitative real-time PCR (qPCR), a widely employed method for pathogen detection. However, the lack of universal reference materials traceable to the International System of Units (SI) compromises the accuracy and comparability of quantitative results. To address this gap, we developed a plasmid RM for the quantitative detection of the <em>Bovine Parvovirus</em> (BPV) VP1 gene. To determine the reference value of the plasmid RM, we established a highly accurate and specific digital PCR (dPCR) method. This dPCR assay demonstrated excellent linearity across five orders of magnitude (10<small><sup>0</sup></small>–10<small><sup>5</sup></small> copies/reaction, <em>R</em><small><sup>2</sup></small> &gt; 0.999). The limits of detection (LOD) and quantification (LOQ) were determined to be 9 copies/reaction and 30 copies/reaction, respectively. Using the validated dPCR method, the reference value of the BPV plasmid RM was quantified as (2.21 ± 0.25) × 10<small><sup>6</sup></small> copies per μL, with an expanded uncertainty (coverage factor <em>k</em> = 2). The developed plasmid RM provides a reliable standard for the quantitative detection of BPV using qPCR, offering improved accuracy and traceability in diagnostic applications.</p>","PeriodicalId":64,"journal":{"name":"Analytical Methods","volume":" 26","pages":" 5466-5472"},"PeriodicalIF":2.6000,"publicationDate":"2025-06-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Analytical Methods","FirstCategoryId":"92","ListUrlMain":"https://pubs.rsc.org/en/content/articlelanding/2025/ay/d5ay00491h","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, ANALYTICAL","Score":null,"Total":0}
引用次数: 0

Abstract

Reference materials (RMs) serve as essential standards for the quantitative analysis of nucleic acid molecules using quantitative real-time PCR (qPCR), a widely employed method for pathogen detection. However, the lack of universal reference materials traceable to the International System of Units (SI) compromises the accuracy and comparability of quantitative results. To address this gap, we developed a plasmid RM for the quantitative detection of the Bovine Parvovirus (BPV) VP1 gene. To determine the reference value of the plasmid RM, we established a highly accurate and specific digital PCR (dPCR) method. This dPCR assay demonstrated excellent linearity across five orders of magnitude (100–105 copies/reaction, R2 > 0.999). The limits of detection (LOD) and quantification (LOQ) were determined to be 9 copies/reaction and 30 copies/reaction, respectively. Using the validated dPCR method, the reference value of the BPV plasmid RM was quantified as (2.21 ± 0.25) × 106 copies per μL, with an expanded uncertainty (coverage factor k = 2). The developed plasmid RM provides a reliable standard for the quantitative detection of BPV using qPCR, offering improved accuracy and traceability in diagnostic applications.

Abstract Image

质粒标准物质的研制提高牛细小病毒定量检测的准确性。
实时荧光定量PCR (quantitative real-time PCR, qPCR)是一种广泛应用于病原体检测的方法,在对核酸分子进行定量分析时,标准物质(RMs)是必不可少的标准物。然而,由于缺乏可追溯到国际单位制(SI)的通用参考材料,影响了定量结果的准确性和可比性。为了解决这一空白,我们开发了一种质粒RM用于牛细小病毒(BPV) VP1基因的定量检测。为了确定质粒RM的参考值,我们建立了一种高准确度和特异性的数字PCR (dPCR)方法。该dPCR检测在5个数量级(100-105拷贝/反应,R2 > 0.999)上表现出良好的线性关系。检测限(LOD)和定量限(LOQ)分别为9拷贝/反应和30拷贝/反应。采用验证的dPCR方法,将BPV质粒RM的参考值定量为(2.21±0.25)× 106拷贝/ μL,扩大不确定度(覆盖因子k = 2)。所开发的质粒RM为使用qPCR定量检测BPV提供了可靠的标准,在诊断应用中提供了更高的准确性和可追溯性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Analytical Methods
Analytical Methods CHEMISTRY, ANALYTICAL-FOOD SCIENCE & TECHNOLOGY
CiteScore
5.10
自引率
3.20%
发文量
569
审稿时长
1.8 months
期刊介绍: Early applied demonstrations of new analytical methods with clear societal impact
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信