Machine Learning Characterization of Immunometabolism in the Tumor Microenvironment and Immunotherapy Responses in Bladder Cancer.

IF 3.2 4区 医学 Q3 IMMUNOLOGY
Wei Peng, Xiaoshan Li, Shiping Wei, Wei Liu
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引用次数: 0

Abstract

Immune dysregulation and metabolism reprogramming are implicated in bladder cancer (BLCA), the relationships between immunometabolism (IMB) and BLCA remain poorly understood. We identified the expression patterns of IMB-related genes and their relationship with prognosis, ultimately developing a machine learning prognostic model. We performed a comprehensive investigation into UCN2 function in BLCA by qPCR, immunohistochemistry, Western blot, Transwell migration assay, and flow cytometry analysis. Two BLCA subclasses were identified, each exhibiting distinctive molecular patterns. Then, an IMB.score was conducted, the IMB.score not only reflected the characteristics of the clinical but also provided insights into immunotherapy efficacy. Specifically, high IMB.score category exhibited a more active TME and unfavorable prognosis; those in the high IMB.score category were more responsive to immunotherapy, suggesting an "immunity tidal model" phenotype. Besides, UCN2 is overexpressed in BLCA tissues, and was found to be positively associated with malignant phenotypes and a poorer prognosis for BLCA. Furthermore, by silencing the expression of UCN2, we observed a significant reduction in the proliferation, migration, and invasion of BLCA cells in vitro. UCN2 is considered a crucial gene in IMB that plays a significant role in the onset and development of BLCA.

膀胱癌肿瘤微环境中免疫代谢的机器学习表征和免疫治疗反应。
免疫失调和代谢重编程与膀胱癌(BLCA)有关,免疫代谢(IMB)与BLCA之间的关系尚不清楚。我们确定了imb相关基因的表达模式及其与预后的关系,最终建立了机器学习预后模型。我们通过qPCR、免疫组织化学、Western blot、Transwell迁移实验和流式细胞术分析对UCN2在BLCA中的功能进行了全面的研究。鉴定出两个BLCA亚类,每个亚类都表现出独特的分子模式。然后是IMB。IMB进行了评分。评分不仅反映了临床特点,也为免疫治疗的疗效提供了新的见解。具体来说,就是高IMB。评分类别表现出更活跃的TME和不良预后;那些在高IMB。评分类别对免疫治疗的反应更强,提示“免疫潮汐模型”表型。此外,UCN2在BLCA组织中过表达,并被发现与BLCA的恶性表型和较差预后呈正相关。此外,通过沉默UCN2的表达,我们观察到BLCA细胞在体外的增殖、迁移和侵袭能力显著降低。UCN2被认为是IMB中的一个关键基因,在BLCA的发生和发展中起着重要作用。
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来源期刊
Journal of Immunotherapy
Journal of Immunotherapy 医学-免疫学
CiteScore
6.90
自引率
0.00%
发文量
79
审稿时长
6-12 weeks
期刊介绍: Journal of Immunotherapy features rapid publication of articles on immunomodulators, lymphokines, antibodies, cells, and cell products in cancer biology and therapy. Laboratory and preclinical studies, as well as investigative clinical reports, are presented. The journal emphasizes basic mechanisms and methods for the rapid transfer of technology from the laboratory to the clinic. JIT contains full-length articles, review articles, and short communications.
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