{"title":"Development Of the VAMPCT Score for Predicting Mortality in CKD Patients with COVID-19.","authors":"Chaofan Li, Yue Niu, Xinyan Pan, Dinghua Chen, Fei Liu, Zhe Feng, Yong Wang, Xueying Cao, Jie Wu, Jiabao Liu, Xin Guan, Xuefeng Sun, Li Zhang, Guangyan Cai, Xiangmei Chen, Ping Li","doi":"10.7150/ijms.111558","DOIUrl":null,"url":null,"abstract":"<p><p><b>Background:</b> Chronic kidney disease (CKD) patients with coronavirus disease 2019 (COVID-19) are at significant risk of death. However, clinical identification of high-risk individuals remains suboptimal despite the recognition of many pathophysiological and comorbidity-related risk factors. We aim to develop a clinically simple machine learning (ML)-based score to predict acute COVID-19 mortality among CKD patients. <b>Methods:</b> CKD inpatients with COVID-19 were prospectively enrolled from December 2022 to January 2023 with a three-month follow-up. Feature selection from clinical and laboratory results was performed through least absolute shrinkage and selection operator and stepwise selection. Logistic regression, support vector machine (SVM), random forest, and extreme gradient boosting were applied for ML model development. A predictive score for mortality was constructed using logistic regression. We compared predictive ability between the proposed score and other published scores. <b>Results:</b> 219 CKD patients were included and had a high mortality rate of 25.1%. The SVM model exhibited the best performance, with the validation area under the receiver operating characteristic curve (AUC) being 0.946 (95% CI 0.918, 0.974). The COVID-19 vaccination status, age, monocyte percentage, prothrombin activity, cardiac troponin T, and total bilirubin (\"VAMPCT\") were the most relevant factors and utilized to develop the scoring system with an AUC of 0.960 (95% CI 0.935, 0.985). <b>Conclusion:</b> ML models predicting three-month mortality had favorable performance for CKD patients with COVID-19. The VAMPCT mortality score provided a user-friendly approach.</p>","PeriodicalId":14031,"journal":{"name":"International Journal of Medical Sciences","volume":"22 11","pages":"2782-2791"},"PeriodicalIF":3.2000,"publicationDate":"2025-05-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12163619/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Medical Sciences","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.7150/ijms.111558","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"MEDICINE, GENERAL & INTERNAL","Score":null,"Total":0}
引用次数: 0
Abstract
Background: Chronic kidney disease (CKD) patients with coronavirus disease 2019 (COVID-19) are at significant risk of death. However, clinical identification of high-risk individuals remains suboptimal despite the recognition of many pathophysiological and comorbidity-related risk factors. We aim to develop a clinically simple machine learning (ML)-based score to predict acute COVID-19 mortality among CKD patients. Methods: CKD inpatients with COVID-19 were prospectively enrolled from December 2022 to January 2023 with a three-month follow-up. Feature selection from clinical and laboratory results was performed through least absolute shrinkage and selection operator and stepwise selection. Logistic regression, support vector machine (SVM), random forest, and extreme gradient boosting were applied for ML model development. A predictive score for mortality was constructed using logistic regression. We compared predictive ability between the proposed score and other published scores. Results: 219 CKD patients were included and had a high mortality rate of 25.1%. The SVM model exhibited the best performance, with the validation area under the receiver operating characteristic curve (AUC) being 0.946 (95% CI 0.918, 0.974). The COVID-19 vaccination status, age, monocyte percentage, prothrombin activity, cardiac troponin T, and total bilirubin ("VAMPCT") were the most relevant factors and utilized to develop the scoring system with an AUC of 0.960 (95% CI 0.935, 0.985). Conclusion: ML models predicting three-month mortality had favorable performance for CKD patients with COVID-19. The VAMPCT mortality score provided a user-friendly approach.
背景:慢性肾脏疾病(CKD)合并冠状病毒病2019 (COVID-19)患者存在显著的死亡风险。然而,尽管认识到许多病理生理和合并症相关的危险因素,临床对高危个体的识别仍然不够理想。我们的目标是开发一种基于临床简单机器学习(ML)的评分来预测CKD患者的急性COVID-19死亡率。方法:前瞻性纳入2022年12月至2023年1月期间合并COVID-19的CKD住院患者,随访3个月。通过最小绝对收缩和选择算子和逐步选择,从临床和实验室结果中进行特征选择。采用Logistic回归、支持向量机(SVM)、随机森林和极端梯度增强等方法开发机器学习模型。使用逻辑回归构建死亡率预测评分。我们比较了建议得分和其他公布得分之间的预测能力。结果:纳入219例CKD患者,死亡率为25.1%。SVM模型在受试者工作特征曲线下的验证面积(AUC)为0.946 (95% CI 0.918, 0.974)。COVID-19疫苗接种状况、年龄、单核细胞百分比、凝血酶原活性、心肌肌钙蛋白T和总胆红素(VAMPCT)是最相关的因素,并用于建立AUC为0.960 (95% CI 0.935, 0.985)的评分系统。结论:ML模型预测CKD合并COVID-19患者3个月死亡率具有较好的效果。VAMPCT死亡率评分提供了一种用户友好的方法。
期刊介绍:
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