High-throughput multiplex voltage-clamp/current-clamp evaluation of acutely isolated neurons.

IF 16 1区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Mohammad-Reza Ghovanloo, Sidharth Tyagi, Peng Zhao, Emre Kiziltug, Mark Estacion, Philip R Effraim, Sulayman D Dib-Hajj, Stephen G Waxman
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引用次数: 0

Abstract

The patch-clamp technique remains the gold-standard for the investigation of excitable cells. However, the manual implementation of this technique is slow and low throughput. While recently developed high-throughput robotic patch-clamp methods have proven valuable for drug screening, they have predominantly focused on investigating receptors and channels overexpressed in heterologous cell lines. We recently developed an automated high-throughput patch-clamp approach that enables the simultaneous and unbiased analysis of acutely dissociated neurons in their native state. To analyze and manage the large and complex datasets resulting from this methodology, we have also developed open-source software with an easy-to-use graphical user interface to fit data from each neuron with appropriate biophysical equations to functionally characterize each individual neuron. Here we describe a protocol that provides a streamlined set of procedures, including (1) the dissociation and isolation of neurons from intact tissue; (2) the designing and performing of patch-clamp experiments on the robotic system; and (3) the analysis of data using predetermined, unbiased filtration criteria. This methodology can be used for diverse applications ranging from the assessment of neuronal biophysics to drug development. The protocol requires 6-18 h including cell preparation, experimental execution and analysis of the generated data. Graduate-student-level expertise in animal dissection, electrophysiology and biophysics is required.

急性分离神经元的高通量多重电压箝位/电流箝位评价。
膜片钳技术仍然是研究可兴奋细胞的金标准。然而,这种技术的手工实现速度很慢,吞吐量也很低。虽然最近开发的高通量机器人膜片钳方法已被证明对药物筛选有价值,但它们主要集中在研究异源细胞系中过表达的受体和通道。我们最近开发了一种自动化的高通量膜片钳方法,可以同时和公正地分析原生状态下的急性解离神经元。为了分析和管理由这种方法产生的大型和复杂的数据集,我们还开发了开源软件,具有易于使用的图形用户界面,以适合每个神经元的数据与适当的生物物理方程,以功能表征每个神经元。在这里,我们描述了一种方案,提供了一套精简的程序,包括(1)分离和分离完整组织的神经元;(2)机器人系统膜片钳实验的设计与实施;(3)使用预定的、无偏的过滤标准对数据进行分析。这种方法可用于从神经生物物理学评估到药物开发的各种应用。该方案需要6-18小时,包括细胞制备,实验执行和生成数据的分析。要求具有研究生水平的动物解剖、电生理学和生物物理学专业知识。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Nature Protocols
Nature Protocols 生物-生化研究方法
CiteScore
29.10
自引率
0.70%
发文量
128
审稿时长
4 months
期刊介绍: Nature Protocols focuses on publishing protocols used to address significant biological and biomedical science research questions, including methods grounded in physics and chemistry with practical applications to biological problems. The journal caters to a primary audience of research scientists and, as such, exclusively publishes protocols with research applications. Protocols primarily aimed at influencing patient management and treatment decisions are not featured. The specific techniques covered encompass a wide range, including but not limited to: Biochemistry, Cell biology, Cell culture, Chemical modification, Computational biology, Developmental biology, Epigenomics, Genetic analysis, Genetic modification, Genomics, Imaging, Immunology, Isolation, purification, and separation, Lipidomics, Metabolomics, Microbiology, Model organisms, Nanotechnology, Neuroscience, Nucleic-acid-based molecular biology, Pharmacology, Plant biology, Protein analysis, Proteomics, Spectroscopy, Structural biology, Synthetic chemistry, Tissue culture, Toxicology, and Virology.
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