Mitogenomic phylogeny of Tetrigoidea (Insecta, Orthoptera), with a focus on the genus Zhengitettix.

IF 2.4 3区 生物学 Q2 MULTIDISCIPLINARY SCIENCES
PeerJ Pub Date : 2025-06-09 eCollection Date: 2025-01-01 DOI:10.7717/peerj.19521
Xuejuan Li, Wenli Dou, Liliang Lin
{"title":"Mitogenomic phylogeny of Tetrigoidea (Insecta, Orthoptera), with a focus on the genus <i>Zhengitettix</i>.","authors":"Xuejuan Li, Wenli Dou, Liliang Lin","doi":"10.7717/peerj.19521","DOIUrl":null,"url":null,"abstract":"<p><p>The mitochondrial genome (mitogenome) has been widely used to infer the phylogeny, origin and evolution of Orthopteran insects. Although several mitogenomic data have been used to study the phylogenetic relationships of Tetrigoidea (Orthoptera), the phylogenetic status of several subfamilies and tribes was still unclear due to the limited sampling of taxon. To further analyze the mitogenomic features and phylogeny of Tetrigoidea, five mitogenomes (<i>Zhengitettix curvispinus</i>, <i>Z. hainanensis</i>, <i>Scelimena melli</i>, <i>Eucriotettix oculatus</i> and <i>Thoradonta yunnana</i>) were sequenced and analyzed in this study, with <i>Z. hainanensis</i> being the newly published mitogenome and <i>Z. curvispinus</i> and <i>S. melli</i> being the complete mitogenomes. Nucleotide composition showed that more A and T bases than C and G bases were found in the sampled mitogenomes, with A- and C-skew. A large intergenic region containing tandem repeats was identified between trnS(ucn) and nad1 in the <i>Z. curvispinus</i> mitogenome. The protein-coding genes (PCGs) used ATG and TAA as the most common initiation and termination codons, respectively. The tRNAs showed a typical clover secondary structure in the <i>Z. curvispinus</i>. The A+T-rich region contained tandem repeats in <i>Z. curvispinus</i>. Phylogenetic analyses of Tetrigoidea based on the maximum likelihood (ML) and Bayesian inference (BI) method supported several non-monophyly subfamilies and tribes, such as Scelimeninae and Thoradontini. Divergence time results showed that Tetrigoidea is one of the basal branch of Orthoptera, with Batrachideinae splitting first, followed by Tripetalocerinae. The genera diverged over a relatively long period, expanding from the Jurassic to the Neogene. These results provide useful data for the study of the mitogenome characteristic of the Tetrigoidea and even the whole Orthoptera, and were basic resources for their phylogeny and evolution study.</p>","PeriodicalId":19799,"journal":{"name":"PeerJ","volume":"13 ","pages":"e19521"},"PeriodicalIF":2.4000,"publicationDate":"2025-06-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12161130/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"PeerJ","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.7717/peerj.19521","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
引用次数: 0

Abstract

The mitochondrial genome (mitogenome) has been widely used to infer the phylogeny, origin and evolution of Orthopteran insects. Although several mitogenomic data have been used to study the phylogenetic relationships of Tetrigoidea (Orthoptera), the phylogenetic status of several subfamilies and tribes was still unclear due to the limited sampling of taxon. To further analyze the mitogenomic features and phylogeny of Tetrigoidea, five mitogenomes (Zhengitettix curvispinus, Z. hainanensis, Scelimena melli, Eucriotettix oculatus and Thoradonta yunnana) were sequenced and analyzed in this study, with Z. hainanensis being the newly published mitogenome and Z. curvispinus and S. melli being the complete mitogenomes. Nucleotide composition showed that more A and T bases than C and G bases were found in the sampled mitogenomes, with A- and C-skew. A large intergenic region containing tandem repeats was identified between trnS(ucn) and nad1 in the Z. curvispinus mitogenome. The protein-coding genes (PCGs) used ATG and TAA as the most common initiation and termination codons, respectively. The tRNAs showed a typical clover secondary structure in the Z. curvispinus. The A+T-rich region contained tandem repeats in Z. curvispinus. Phylogenetic analyses of Tetrigoidea based on the maximum likelihood (ML) and Bayesian inference (BI) method supported several non-monophyly subfamilies and tribes, such as Scelimeninae and Thoradontini. Divergence time results showed that Tetrigoidea is one of the basal branch of Orthoptera, with Batrachideinae splitting first, followed by Tripetalocerinae. The genera diverged over a relatively long period, expanding from the Jurassic to the Neogene. These results provide useful data for the study of the mitogenome characteristic of the Tetrigoidea and even the whole Orthoptera, and were basic resources for their phylogeny and evolution study.

蚱总科(昆虫纲,直翅目)的有丝分裂学系统发育,以蚱属为中心。
线粒体基因组(mitogenome)已被广泛用于推测直翅目昆虫的系统发育、起源和进化。虽然有丝分裂基因组学数据已被用于研究直翅目蚱总科的系统发育关系,但由于分类单元取样有限,对蚱总科和蚱总科的系统发育状况尚不清楚。​核苷酸组成表明,有丝分裂基因组中A、T碱基多于C、G碱基,呈A、C偏态。在Z. curvispinus有丝分裂基因组的trn (ucn)和nad1之间发现了一个包含串联重复序列的大基因间区。蛋白质编码基因(PCGs)分别以ATG和TAA作为最常见的起始密码子和终止密码子。这些trna在曲叶松中表现出典型的三叶草二级结构。曲线竹富含A+ t的区域含有串联重复序列。基于最大似然(ML)和贝叶斯推理(BI)方法的蚱总科系统发育分析支持了多个非单系亚科和部落,如scelimenae和Thoradontini。分化时间结果表明,蚱总科是直翅目的基支之一,蚱总科首先分裂,其次是蚱总科。该属在相对较长的时期内分化,从侏罗纪扩展到新近纪。这些结果为研究蚱总科乃至整个直翅目昆虫的有丝分裂基因组特征提供了有用的数据,并为其系统发育和进化研究提供了基础资源。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
PeerJ
PeerJ MULTIDISCIPLINARY SCIENCES-
CiteScore
4.70
自引率
3.70%
发文量
1665
审稿时长
10 weeks
期刊介绍: PeerJ is an open access peer-reviewed scientific journal covering research in the biological and medical sciences. At PeerJ, authors take out a lifetime publication plan (for as little as $99) which allows them to publish articles in the journal for free, forever. PeerJ has 5 Nobel Prize Winners on the Board; they have won several industry and media awards; and they are widely recognized as being one of the most interesting recent developments in academic publishing.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信