Machine learning assisted analysis of rice flower opening times using a low-cost time-lapse camera.

IF 2.7 3区 生物学 Q2 PLANT SCIENCES
Tomoaki Muranaka, Moeka Matsuura, Kan Yokoyama, Yuuki Gatayama, Satoru Taura, Katsuyuki Ichitani, Eiji Kanda
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引用次数: 0

Abstract

Flower opening time (FOT) is a key trait for successful reproduction and reproductive isolation. In crop science, FOT is critical for stress avoidance and efficient breeding practices. This study developed a system for the automatic detection of rice flower openings and FOT estimation by integrating a low-cost time-lapse camera with machine learning technology. This approach enabled high-resolution monitoring of flowering dynamics in two cultivars: the japonica cultivar Taichung 65 (T65) and the indica cultivar IR24. The system accurately identified regions containing open flowers, and the estimated FOTs varied within a 3-h range, with a root mean square error of approximately 30 min compared to manual detection. A significant difference in estimated FOTs between IR24 and T65 demonstrated the system's potential for genetic screening applications. FOT of both cultivars exhibited a significant negative correlation with daily mean temperature. Notably, a temperature-sensitive period was identified in the morning, suggesting that temperature influences not only flower opening but also preceding physiological processes such as panicle and spikelet development. This study presents a novel approach to investigating FOT dynamics in rice and provides insights into the interaction between environmental factors and internal regulatory mechanisms governing this critical reproductive trait.

机器学习辅助分析水稻开花时间使用低成本的延时相机。
开花时间(FOT)是决定植物繁殖成功与否和生殖隔离与否的关键性状。在作物科学中,FOT对于避免压力和有效的育种实践至关重要。本研究通过将低成本延时相机与机器学习技术相结合,开发了一个自动检测水稻花开口和ft估计的系统。该方法实现了粳稻品种台中65 (T65)和籼稻品种IR24开花动态的高分辨率监测。该系统准确地识别了含有开放花朵的区域,估计的fot在3小时的范围内变化,与人工检测相比,均方根误差约为30分钟。IR24和T65之间估计fot的显著差异表明该系统具有遗传筛选应用的潜力。两个品种的FOT均与日平均温度呈显著负相关。值得注意的是,在早晨发现了一个温度敏感期,这表明温度不仅影响开花,还影响穗和小穗发育等前期生理过程。本研究提出了一种研究水稻ft动态的新方法,并提供了环境因素与控制这一关键生殖性状的内部调节机制之间相互作用的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Plant Research
Journal of Plant Research 生物-植物科学
CiteScore
5.40
自引率
3.60%
发文量
59
审稿时长
1 months
期刊介绍: The Journal of Plant Research is an international publication that gathers and disseminates fundamental knowledge in all areas of plant sciences. Coverage extends to every corner of the field, including such topics as evolutionary biology, phylogeography, phylogeny, taxonomy, genetics, ecology, morphology, physiology, developmental biology, cell biology, molecular biology, biochemistry, biophysics, bioinformatics, and systems biology. The journal presents full-length research articles that describe original and fundamental findings of significance that contribute to understanding of plants, as well as shorter communications reporting significant new findings, technical notes on new methodology, and invited review articles.
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