Molecular characterization of Panstrongylus chinai from northern Peru and its phylogenetic relationship to ecuadorian populations using the COI gene.

IF 1 Q3 Medicine
Archi Alejandro Ruiz-Polo, Angélica Maria Vigil-Correa, Lya Emilia Niño-Mendoza, Rosa Elena Santillan-Valdivia
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引用次数: 0

Abstract

Objective.: To determine the molecular characterization of Panstrongylus chinai from northern Peru and its phylogenetic relationship with Ecuadorian populations using the Cytochrome C Oxidase Subunit I (COI) gene.

Materials and methods.: We analyzed three adult female P. chinai specimens from populations reared under laboratory conditions, from rural localities in the department of Piura. The legs of each specimen were dissected from the coxa to the tibia, discarding the tarsi and nails, then the DNA was extracted, and a polymerase chain reaction (PCR) of the COI gene was carried out. The PCR products were sequenced by Sanger and analyzed with DNA sequences of the COI gene of P. chinai from Ecuador, obtained from the NCBI portal, Genbank. The DNA sequences of the study, together with similar sequences found in the NCBI database, were inserted into the MEGA v.11 software to construct a phylogenetic tree. They were then transferred to the DnaSP v.5 software for molecular characterization by haplotypes.

Results.: Molecular characterization revealed the presence of three haplotypes circulating in the department of Piura, different from the haplotype previously reported in Ecuador. Likewise, phylogenetic analysis suggests the emergence of the evolutionary process of cladogenesis, in which the Ecuadorian variant may have originated from populations of P. chinai from northern Peru.

Conclusions.: P. chinai from Ecuador and northern Peru have different molecular characteristics and a descending phylogeny, which infer distribution from Peru to Ecuador.

秘鲁北部中国泛圆线虫的分子特征及其与厄瓜多尔种群的COI基因系统发育关系。
目标。目的:利用细胞色素C氧化酶亚基I (Cytochrome C Oxidase Subunit I, COI)基因确定秘鲁北部中国泛圆线虫的分子特征及其与厄瓜多尔种群的系统发育关系。材料和方法。我们分析了来自Piura省农村地区在实验室条件下饲养的三个成年雌性中华p.p ainai标本。每个标本的腿从髋部到胫骨解剖,去跗骨和趾甲,提取DNA,进行COI基因聚合酶链反应(PCR)。PCR产物经Sanger测序,并与从NCBI门户网站Genbank中获取的厄瓜多尔中华p.p ainai COI基因DNA序列进行分析。将该研究的DNA序列与NCBI数据库中发现的相似序列一起插入MEGA v.11软件中构建系统发育树。结果:分子鉴定显示Piura省存在三种单倍型,不同于先前在厄瓜多尔报道的单倍型。结论:来自厄瓜多尔和秘鲁北部的中华卷烟具有不同的分子特征和下降的系统发育,推断其分布从秘鲁到厄瓜多尔。
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来源期刊
Revista Peruana de Medicina de Experimental y Salud Publica
Revista Peruana de Medicina de Experimental y Salud Publica Medicine-Public Health, Environmental and Occupational Health
CiteScore
3.00
自引率
0.00%
发文量
57
审稿时长
12 weeks
期刊介绍: La Revista Peruana de Medicina Experimental y Salud Pública (RPMESP) es el órgano oficial de difusión científica del Instituto Nacional de Salud (INS) del Perú. Es una publicación arbitrada por pares, de periodicidad trimestral, de ámbito y difusión mundial, indizada en MEDLINE/Index Medicos, SCOPUS, EMBASE, SciELO Salud Pública y otras bases de datos internacionales. La RPMESP es distribuida en su versión impresa y electrónica, con acceso gratuito a texto completo. La RPMESP publica artículos referidos a temas del ámbito biomédico y de salud pública, resaltando aportes prácticos, que contribuyan a mejorar la situación de salud del país y de la región. Propicia el intercambio de la experiencia científica en salud entre instituciones y personas dedicadas a la investigación dentro y fuera del Perú a fin de promover el avance y la aplicación de la investigación en salud.
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