Zili Gao, Yuzhen Zhang, Laura C Harrington, Courtney C Murdock, Elisabeth Martin, Dalton Manbeck-Mosig, Steve Vetrone, Nicolas Tremblay, Christopher M Barker, John M Clark, Lili He, Wei Zhu
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引用次数: 0
Abstract
Background: Mosquito-borne diseases, such as malaria, dengue, and Zika, continue to pose significant threats to global health, resulting in millions of cases and thousands of deaths each year. Notably, only older mosquitoes can transmit these diseases. Therefore, accurate age estimation of mosquitoes is vital for targeted interventions and risk assessments. However, traditional methods, such as tracheole morphology analysis, are labor-intensive and have limited scalability. Surface-enhanced Raman spectroscopy (SERS), when coupled with artificial neural networks (ANNs), offers a robust and flexible alternative, facilitating accurate and efficient mosquito age determination even in diverse and complex environmental conditions.
Methods: We analyzed 124 Aedes aegypti mosquitoes from California (CA) and Thailand (TH) using SERS, each generating 20 spectra. The ANNs utilized a multilayer perceptron with two hidden layers of 100 neurons and rectified linear unit (ReLU) activation. Classification tasks used cross-entropy loss; regression applied mean squared error. Models were trained with a 70-30 training-validation split and optimized using the Adam optimizer over 10,000 iterations. Performance metrics included accuracy, correlation coefficient (R), and root mean square error (RMSE). t-Distributed stochastic neighbor embedding (t-SNE) visualizations and confusion matrices offered additional model insights into effectiveness.
Results: The ANN models demonstrated superior performance in differentiating mosquito age relative to non-ANN methods. For female CA mosquitoes, the models classified ages from day 1 to day 21 with 84% accuracy and predicted age with an R of 0.96 and RMSE of 2.18 days. Similarly, the models achieved 86% accuracy and an R-value of 0.95 for female TH mosquitoes. While mosquito origin and sex influenced performance, the combined model maintained robust results, achieving 80% accuracy and an R-value of 0.93. Implementing a voting mechanism across multiple spectra for each mosquito significantly improved accuracy, increasing classification performance from approximately 80% at the spectrum level to 100% at the mosquito level.
Conclusions: This study demonstrates the effectiveness of SERS combined with ANN for accurate age classification and prediction of Ae. aegypti mosquitoes. The models achieved high accuracy across diverse populations, with a voting mechanism enhancing classification to 100%. These findings highlight the potential of SERS-ANN as a reliable tool for vector control and disease surveillance.
期刊介绍:
Parasites & Vectors is an open access, peer-reviewed online journal dealing with the biology of parasites, parasitic diseases, intermediate hosts, vectors and vector-borne pathogens. Manuscripts published in this journal will be available to all worldwide, with no barriers to access, immediately following acceptance. However, authors retain the copyright of their material and may use it, or distribute it, as they wish.
Manuscripts on all aspects of the basic and applied biology of parasites, intermediate hosts, vectors and vector-borne pathogens will be considered. In addition to the traditional and well-established areas of science in these fields, we also aim to provide a vehicle for publication of the rapidly developing resources and technology in parasite, intermediate host and vector genomics and their impacts on biological research. We are able to publish large datasets and extensive results, frequently associated with genomic and post-genomic technologies, which are not readily accommodated in traditional journals. Manuscripts addressing broader issues, for example economics, social sciences and global climate change in relation to parasites, vectors and disease control, are also welcomed.