Determining mosquito age using surface-enhanced Raman spectroscopy and artificial neural networks: insights into the influence of origin and sex.

IF 3 2区 医学 Q1 PARASITOLOGY
Zili Gao, Yuzhen Zhang, Laura C Harrington, Courtney C Murdock, Elisabeth Martin, Dalton Manbeck-Mosig, Steve Vetrone, Nicolas Tremblay, Christopher M Barker, John M Clark, Lili He, Wei Zhu
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引用次数: 0

Abstract

Background: Mosquito-borne diseases, such as malaria, dengue, and Zika, continue to pose significant threats to global health, resulting in millions of cases and thousands of deaths each year. Notably, only older mosquitoes can transmit these diseases. Therefore, accurate age estimation of mosquitoes is vital for targeted interventions and risk assessments. However, traditional methods, such as tracheole morphology analysis, are labor-intensive and have limited scalability. Surface-enhanced Raman spectroscopy (SERS), when coupled with artificial neural networks (ANNs), offers a robust and flexible alternative, facilitating accurate and efficient mosquito age determination even in diverse and complex environmental conditions.

Methods: We analyzed 124 Aedes aegypti mosquitoes from California (CA) and Thailand (TH) using SERS, each generating 20 spectra. The ANNs utilized a multilayer perceptron with two hidden layers of 100 neurons and rectified linear unit (ReLU) activation. Classification tasks used cross-entropy loss; regression applied mean squared error. Models were trained with a 70-30 training-validation split and optimized using the Adam optimizer over 10,000 iterations. Performance metrics included accuracy, correlation coefficient (R), and root mean square error (RMSE). t-Distributed stochastic neighbor embedding (t-SNE) visualizations and confusion matrices offered additional model insights into effectiveness.

Results: The ANN models demonstrated superior performance in differentiating mosquito age relative to non-ANN methods. For female CA mosquitoes, the models classified ages from day 1 to day 21 with 84% accuracy and predicted age with an R of 0.96 and RMSE of 2.18 days. Similarly, the models achieved 86% accuracy and an R-value of 0.95 for female TH mosquitoes. While mosquito origin and sex influenced performance, the combined model maintained robust results, achieving 80% accuracy and an R-value of 0.93. Implementing a voting mechanism across multiple spectra for each mosquito significantly improved accuracy, increasing classification performance from approximately 80% at the spectrum level to 100% at the mosquito level.

Conclusions: This study demonstrates the effectiveness of SERS combined with ANN for accurate age classification and prediction of Ae. aegypti mosquitoes. The models achieved high accuracy across diverse populations, with a voting mechanism enhancing classification to 100%. These findings highlight the potential of SERS-ANN as a reliable tool for vector control and disease surveillance.

使用表面增强拉曼光谱和人工神经网络确定蚊子年龄:对起源和性别影响的见解。
背景:疟疾、登革热和寨卡等蚊媒疾病继续对全球健康构成重大威胁,每年导致数百万病例和数千人死亡。值得注意的是,只有年龄较大的蚊子才能传播这些疾病。因此,准确估计蚊子的年龄对于有针对性的干预和风险评估至关重要。然而,传统的方法,如气管形态分析,是劳动密集型的,并且具有有限的可扩展性。表面增强拉曼光谱(SERS)与人工神经网络(ann)相结合,提供了一种强大而灵活的替代方案,即使在多样化和复杂的环境条件下,也能促进准确和有效的蚊子年龄测定。方法:对来自美国加州和泰国的124只埃及伊蚊进行SERS分析,各产生20个光谱。人工神经网络使用了一个多层感知器,其中包含两个隐藏层,包含100个神经元和整流线性单元(ReLU)激活。分类任务采用交叉熵损失;回归应用均方误差。模型以70-30的训练-验证分割进行训练,并使用Adam优化器进行10,000次迭代优化。性能指标包括准确性、相关系数(R)和均方根误差(RMSE)。t分布随机邻居嵌入(t-SNE)可视化和混淆矩阵提供了对有效性的额外模型见解。结果:与非神经网络方法相比,人工神经网络模型在蚊虫年龄判别方面表现出更好的效果。对于雌性CA蚊,该模型对1 - 21天的年龄划分准确率为84%,预测年龄的R为0.96,RMSE为2.18天。同样,该模型对雌性TH蚊的准确率为86%,r值为0.95。虽然蚊子的来源和性别影响了性能,但组合模型保持了稳健的结果,达到80%的准确率,r值为0.93。在每个蚊子的多个光谱上实施投票机制可以显著提高准确率,将光谱级别的分类性能从大约80%提高到100%。结论:本研究验证了SERS联合ANN对Ae的准确年龄分类和预测的有效性。蚊。这些模型在不同的人群中实现了很高的准确率,投票机制将分类提高到100%。这些发现突出了SERS-ANN作为病媒控制和疾病监测的可靠工具的潜力。
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来源期刊
Parasites & Vectors
Parasites & Vectors 医学-寄生虫学
CiteScore
6.30
自引率
9.40%
发文量
433
审稿时长
1.4 months
期刊介绍: Parasites & Vectors is an open access, peer-reviewed online journal dealing with the biology of parasites, parasitic diseases, intermediate hosts, vectors and vector-borne pathogens. Manuscripts published in this journal will be available to all worldwide, with no barriers to access, immediately following acceptance. However, authors retain the copyright of their material and may use it, or distribute it, as they wish. Manuscripts on all aspects of the basic and applied biology of parasites, intermediate hosts, vectors and vector-borne pathogens will be considered. In addition to the traditional and well-established areas of science in these fields, we also aim to provide a vehicle for publication of the rapidly developing resources and technology in parasite, intermediate host and vector genomics and their impacts on biological research. We are able to publish large datasets and extensive results, frequently associated with genomic and post-genomic technologies, which are not readily accommodated in traditional journals. Manuscripts addressing broader issues, for example economics, social sciences and global climate change in relation to parasites, vectors and disease control, are also welcomed.
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